Gene Information

Name : kdsB (SULAZ_1013)
Accession : YP_002728986.1
Strain : Sulfurihydrogenibium azorense Az-Fu1
Genome accession: NC_012438
Putative virulence/resistance : Virulence
Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : 2.7.7.38
Position : 937367 - 938089 bp
Length : 723 bp
Strand : -
Note : identified by match to protein family HMM PF02348; match to protein family HMM TIGR00466

DNA sequence :
ATGAAAAAAGCTATATTTATTCCGGCTCGTAGAGGCTCTACAAGGTTAAAAGATAAGCTACTTTTACCCGTAAAAGACAA
ACCTGTTATAGCTTGGACTGTGGAAAATGCTTTAAAGGTTGGTTATCCTGTTGTAGTTGTGTGTGATGATTTAGAGTTTA
AAAATGTCTTAAAAGACTATCCAGTAGAAGTGATACTAACACCTTCAGACTTAAAAAGTGGCTCAGACAGAGTAGCCTTT
GCGTTAAAAGATTTAGACTATGACACTGTTGTAAACCTACAAGGAGATGAACCTACAGTAGACCCACAAGATATAAAAAA
AATATTCCAAGCACTTGAAAAAGACAAAGTTGCTACCTTATCCTACCCTATAGAAAAAGAAGAAGACTACATAAACCCAA
ACATAGTTAAAGTCGTGATAGACAAAGACAATTACGCCCTTTACTTCTCAAGAAGTCCTATTCCATTTTACAGAGATATA
GACTTTTCAAAAATGCTAAACATACTAAAACCTCAAAAACATATAGGTATATACGGCTATAGAAAAGAAGTTTTGTTGGA
CTTTTCATTTAAACTCAGCCCTTCAACTATAGAAGAGGTAGAAAAGTTAGAACAGCTCAGACTACTTTATAACGGCTACA
AAATCAAAGTAATCCAAGCATCAAAAGACACCCTCGGTATAGACACAAAAGAAGACTACGAGAGATTCTGTCAACTAATT
TAA

Protein sequence :
MKKAIFIPARRGSTRLKDKLLLPVKDKPVIAWTVENALKVGYPVVVVCDDLEFKNVLKDYPVEVILTPSDLKSGSDRVAF
ALKDLDYDTVVNLQGDEPTVDPQDIKKIFQALEKDKVATLSYPIEKEEDYINPNIVKVVIDKDNYALYFSRSPIPFYRDI
DFSKMLNILKPQKHIGIYGYRKEVLLDFSFKLSPSTIEEVEKLEQLRLLYNGYKIKVIQASKDTLGIDTKEDYERFCQLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 2e-25 41