Gene Information

Name : repA (USA300HOU_pUSA10HOUMR0001)
Accession : YP_002727814.1
Strain :
Genome accession: NC_012417
Putative virulence/resistance : Unknown
Product : replication initiation protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG5655
EC number : -
Position : 1 - 996 bp
Length : 996 bp
Strand : +
Note : -

DNA sequence : 
ATGCAATATAATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACA
ACGCCCATGGAGAGAAAAGAAAATAGATAATGTAAGCTATGCAGATATACTAGAAATTTTAAAAATCAAAAAGGCTTTTA
ATGTAAAACAATGTGGTAATATTTTAGAATTTAAGCCAACTGATGAAGGCTATTTGAAGTTACATAAGACATGGTTTTGT
AAATCAAAATTATGTCCGGTTTGTAATTGGAGACGTGCTATGAAAAATAGTTATCAAGCTCAAAAAGTGATTGAAAAAGT
AATTAAGGAAAAGCCAAAAGCACGTTGGTTGTTTTTAACACTTTCAACAAAAAATGCGATAGATGGAGATACTTTAGAAC
AAAGTTTGAAGCATCTAACTAAAGCATTTGATAGGTTGAGTAGATATAAAAAGGTTAAACAAAATCTTGTTGGATTTATG
CGTTCAACAGAAGTTACCGTTAATAAAAATGACGGTAGTTATAATCAGCACATGCATGTTTTGTTATGTGTTGAAAATGC
ATATTTTAGAAAAAAAGAGAATTATATAACTCAAGAAGAATGGGTTAATTTATGGCAAAGAGCATTACAAGTTGACTATC
GACCTGTTGCTAATGTTAAAGCGATCAAACCGAATAGAAAAGGCGATAAAGACATTGAATCGGCAATCAAAGAGACCTCA
AAATATTCGGTTAAATCATCTGATTTTTTAACTGATGATGATGAAAAAAATCAAGAAATTGTAAGTGATTTAGAAAAAGG
TTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTGCTTAAACAAAAACATAAAATTTTAAACTTAGACGATGTCGAAG
ATGGTAATTTGATTAATGCAAGTGATGAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGG
AATTTCGAAAAGCAAAATTATTATTTAAGACATTAG

Protein sequence : 
MQYNTTRSITENQDNKTLKDMTKSGKQRPWREKKIDNVSYADILEILKIKKAFNVKQCGNILEFKPTDEGYLKLHKTWFC
KSKLCPVCNWRRAMKNSYQAQKVIEKVIKEKPKARWLFLTLSTKNAIDGDTLEQSLKHLTKAFDRLSRYKKVKQNLVGFM
RSTEVTVNKNDGSYNQHMHVLLCVENAYFRKKENYITQEEWVNLWQRALQVDYRPVANVKAIKPNRKGDKDIESAIKETS
KYSVKSSDFLTDDDEKNQEIVSDLEKGLYRKRMLSYGGLLKQKHKILNLDDVEDGNLINASDEDKTTDEEEKAHSITAIW
NFEKQNYYLRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAV0029 NP_370553.1 hypothetical protein Not tested Type-II SCCmec Protein 2e-69 56
SA0028 NP_373267.1 hypothetical protein Not tested Type-II SCCmec Protein 5e-68 55