Gene Information

Name : katA (BHWA1_00919)
Accession : YP_002721114.1
Strain : Brachyspira hyodysenteriae WA1
Genome accession: NC_012225
Putative virulence/resistance : Unknown
Product : catalase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0753
EC number : -
Position : 1073771 - 1075222 bp
Length : 1452 bp
Strand : -
Note : -

DNA sequence :
ATGTCAGATAAAAAATTAACAACTGAATTCGGTGCTCCGGTTGAAAATAATCAGCATTCTATGACAGCAGGTGCCAGAGG
ACCTATGCTTTTACAAGATGTATGGTTTATGGAAAAGATGGCACATTTTGATAGAGAAGTTATACCTGAAAGAAGAATGC
ATGCTAAAGGTTCAGGTGCTTATGGTACATTTACAGTAACTCATGACATTACACAATATACTAAGGCAAAAATATTCTCT
GAAGTTGGAAAGAAAACTGATTTATTTGTAAGATTTTCTACAGTGGCAGGTGAGAGAGGTGCGGCAGATGCTGAAAGAGA
TATAAGAGGTTTTGCTATTAAATTCTATACTGAAGAAGGAAACTGGGATTTAGTTGGAAATAACACTCCTGTATTTTATT
TCAGAGACCCTTTAAAATTCCCAGATTTGAACCATGCTGTAAAGAGAGATCCTAAAACTAATATGAGAAGTGCTCAAAAT
AAATGGGACTTTCTTACTTCTTTACCAGAAGCTATTCACCAAATAACTATAGATATGAGCGACAGAGGAATACCTTACAG
TTACAGACATATGCATGGTTTCAGCAGTCATGCTTATAGTTTTATAAATAAAGAAGGAAAAAGATATTGGGTAAAATTCC
ATTTCAAAACTCAGCAAGGAATTAAAAATTTAACAGACCAGGAAGCTGAAGCAATCATAGCAAAAGACAGAGAAAGTTCT
CAAAAAGATTTATTTGAAGCTATAGAGAGAGGAGATTTCCCTAGATGGAATATGAAGATTCAAATAATGACTGAAGAACA
GGCTAATGCAAGCAAGAGAAATCCTTTTGACTTAACAAAAACATGGTCTCAAAAAGAATATCCATTAATTGATGTAGGTG
TATTAGAATTAAATAGAAACCCTGAAAACTATTTTGCAGAAGTAGAACAATCAGCATTCAGTCCTTCTACAATAGTTCCT
GGTATAGGATTCTCACCAGACAGAATGCTTCAGGGAAGATTATTCTCATATACTGATACACAAAGATATAGATTAGGTGT
TAACTATTCAAGCATACCTGTAAATGCTCCAAAATTTAAACCTAATACTTATCATAGAGACGGATATATGAGAGTAGAGT
CTAATGGTTCTAAAGTAGAATATGAACCAAACTCTCAGGGAGAATGGAAAGAGCAGAAAGAATATGCTGAACCGCCTCTA
AAAATTTACGGCGATGCTTACAGATATGATCATAGAGAAGATGATGATGATTATTACACAGATGCAAGAGCTTTATTCAA
TCTTATGACAGATGCACAAAAACAAGTATTATTTGAAAATACAGCAAGAGATATGAATGGTGTTACTAAAGAAGTACAAT
TAAGACATATAAAAAATTGTATGAATGTTGATAAAGCTTATGGACTTGGGGTTGCTAAAGCATTGGGCTTTGATGAGAAA
GACATAAAATAA

Protein sequence :
MSDKKLTTEFGAPVENNQHSMTAGARGPMLLQDVWFMEKMAHFDREVIPERRMHAKGSGAYGTFTVTHDITQYTKAKIFS
EVGKKTDLFVRFSTVAGERGAADAERDIRGFAIKFYTEEGNWDLVGNNTPVFYFRDPLKFPDLNHAVKRDPKTNMRSAQN
KWDFLTSLPEAIHQITIDMSDRGIPYSYRHMHGFSSHAYSFINKEGKRYWVKFHFKTQQGIKNLTDQEAEAIIAKDRESS
QKDLFEAIERGDFPRWNMKIQIMTEEQANASKRNPFDLTKTWSQKEYPLIDVGVLELNRNPENYFAEVEQSAFSPSTIVP
GIGFSPDRMLQGRLFSYTDTQRYRLGVNYSSIPVNAPKFKPNTYHRDGYMRVESNGSKVEYEPNSQGEWKEQKEYAEPPL
KIYGDAYRYDHREDDDDYYTDARALFNLMTDAQKQVLFENTARDMNGVTKEVQLRHIKNCMNVDKAYGLGVAKALGFDEK
DIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 3e-153 67
katA YP_005680448.1 catalase Not tested PiCp 3 Protein 6e-91 52
katA YP_005682539.1 catalase Not tested PiCp 3 Protein 6e-91 52
katA YP_003782575.1 catalase Not tested PiCp 3 Protein 6e-91 52
katA YP_005684630.1 catalase Not tested PiCp 3 Protein 6e-91 52