Gene Information

Name : cat (BHWA1_02596)
Accession : YP_002722753.1
Strain : Brachyspira hyodysenteriae WA1
Genome accession: NC_012225
Putative virulence/resistance : Resistance
Product : chloramphenicol acetyltransferase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG4845
EC number : -
Position : 2928796 - 2929446 bp
Length : 651 bp
Strand : +
Note : -

DNA sequence : 
ATGTTTAATAAAATAGATTTAAATAATTATAACAGAAAAGAGCATTATGAAATGTATATGAATAATATTCCATGTACATA
TAGCATAACAGTGCCTTTAAATATTACAAAATTTAAAAAAACTGTCAAAGATAAAAATATTAAATTTTATGCCTCTGTTA
TTTACTTAATATCAAAAGTTGTAAATAAATATAAAGAGTTCAAAATGGCATTGAATGATAATAAAGAACTTGGTTATTAT
GATATTATTAATCCAAGCTATACCATATTTCATAATGATACAAAAACTTTCTCATCCATTTATACAGAATATAATGAAAA
ATTTGATTTGTTTTATAAAAATTATATTTCAGATATAGAAACTTATGGAGAAAATAAAACTTTTTTAGCTAAGCCATGTA
GTATAAATAATATATTTAATATTTCATCACTTCCATTATCAGCTTTTACTAGCTTTAATCTTAATTTACCAAATAGTTTT
GAGTATTTAGCACCAATATTCACTATAGGAAAATACTATACAGATGATAAAAATAATATAATGATGCCTTTATGTTTACA
AATACATCATAGTGTATGCGATGGGTATCATGTTGGCATTTTCTTTGAAGATTTACAAATGGAATTTAATGAATTCAATT
TATTATATTGA

Protein sequence : 
MFNKIDLNNYNRKEHYEMYMNNIPCTYSITVPLNITKFKKTVKDKNIKFYASVIYLISKVVNKYKEFKMALNDNKELGYY
DIINPSYTIFHNDTKTFSSIYTEYNEKFDLFYKNYISDIETYGENKTFLAKPCSINNIFNISSLPLSAFTSFNLNLPNSF
EYLAPIFTIGKYYTDDKNNIMMPLCLQIHHSVCDGYHVGIFFEDLQMEFNEFNLLY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cat YP_006098370.1 chloramphenicol acetyltransferase Not tested Tn2411 Protein 2e-43 44
cat CAJ77070.1 Chloramphenicol acetyltransferase Not tested AbaR1 Protein 1e-43 44
cat AAL08441.1 chloramphenicol acetyltransferase Not tested SRL Protein 2e-42 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cat YP_002722753.1 chloramphenicol acetyltransferase CP004022.1.gene799.p Protein 5e-44 46
cat YP_002722753.1 chloramphenicol acetyltransferase NC_010111.5787932.p0 Protein 2e-38 44
cat YP_002722753.1 chloramphenicol acetyltransferase NC_010410.6002590.p0 Protein 6e-44 44
cat YP_002722753.1 chloramphenicol acetyltransferase NC_011586.7045194.p0 Protein 6e-44 44
cat YP_002722753.1 chloramphenicol acetyltransferase NC_010558.1.6276004. Protein 6e-44 44
cat YP_002722753.1 chloramphenicol acetyltransferase NC_010427.6155852.p0 Protein 1e-36 43
cat YP_002722753.1 chloramphenicol acetyltransferase NC_010426.6155849.p0 Protein 1e-36 43
cat YP_002722753.1 chloramphenicol acetyltransferase CP001581.1.gene2168. Protein 6e-42 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cat YP_002722753.1 chloramphenicol acetyltransferase VFG1032 Protein 9e-43 43