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Name : hlyB (BHWA1_01228) Accession : YP_002721411.1 Strain : Brachyspira hyodysenteriae WA1 Genome accession: NC_012225 Putative virulence/resistance : Virulence Product : hemolysin B Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1414869 - 1417355 bp Length : 2487 bp Strand : - Note : - DNA sequence : ATGTTTCAATTTCATTTAACAAGCAAAGCAAAAAAGGTAATAGAATTATATGCTCAGGAAGAAGCAAAAAGATTAAATCA TGATATGGTTACACCTGAACATATACTTTTGGGGCTTCTTCATGAATCAGAGGCTTTGGCAACACGTGTTTTGATGAGAT TGAAAATTGATTTGGACAGACTTAAATTAGAATTAGAATCAGCTATGGTAAAATCTTCAACTACAAAAGTATTTGGAACT TTACCTACAGCTCCAAGAGTACAGAAACTTATAAGCAGATCTGCTGAAGAGGCTAGGGCTTTAAGTCATAACTATATAGG TACTGAACATTTACTTCTTGGACTTCTAAGAGAAGAAAGTGGTACAGCTTATAATGTACTTACAAGTATGGGGCTTGAGC TTACTATATTAAGACAAGAAATATTAAAAATGCTTGGTGTTGCTGGAAGTAATATTTCTTCTATGGAACAGACAAGTCAG GAAGATAATGTAAAAAAGGTAAAAACACCTACTTTAGATCAATTTGCCAGAGATTTAACTAAAATGGCTAGAGACAAGGC TTTAGACAGAGTTATAGGCAGAGAAAATGAAGTAATGAGAGTTGTTCAGATTTTATCAAGAAGAAAGAAAAATAATCCTA TACTTCTTGGTGAGCCTGGTGTAGGTAAAACAGCTATAGTAGAGGGACTTGCTGAAAAGATAGTAGCTGCTGATGTACCT GATATACTTCTAAAAAAACGTGTATTAACTTTAGATTTGTCTTCAGTTGTTGCTGGTACAAAATACAGAGGTGAATTTGA AGAGAGAATAAAAAACATAGTTTTAGAAATAAAAAAAGCTAGTAATATTATTATATTCATAGATGAGCTTCATACATTAA TAGGGGCAGGCGGTGCTGAAGGTGCTTTAGATGCTGCTAATATGTTAAAGCCGGCACTTTCAAGAGGCGAGATTCAATGT ATAGGTGCCACTACTATAAATGAATATAAAAAATATATAGAAAAAGACGGTGCTTTGGTTAGAAGATTCCAGCCTATAAA TGTTGAAGAGCCTAGTATAGAGGATACTATTGAAATATTGAATGGTATCAAAGGTAAATATGAAGAACATCATAAAGTAA AATATACTGATGAAGCAATAAATGCTGCTGCTGTATTGAGTAAGAGATATATTTTTGAAAGACATTTGCCTGATAAAGCT ATAGACTTAATAGATGAGGCAGGTTCAAGAGCAAGACTTCTTAATATGACAAGACCTCAGGAGTTTAAAGATTTAGAAAA GAAAATAGAAGAGCTTAATCAGCAAAAGAAAAGAGTTGTTGAGAGTCAGAATTTCGAAGATGCTGCTAAAATAAGAGATG AAATTACTTCTTTACAGGAAGAGCTTTCTAAAAAAGAAGAAAAATGGCGTGAAGAAAGAGAAAAGATAGAAACATTTATT GAAGAAGATGATATAAGACATGTTATATCAGAAATAACTAATATACCTATAAAAAGATTATTAAACTCAGAAAGTAAAAG ACTTATAGGTATGGAAGAAGAATTGCATCAGAAAGTCGTAGGACAGAAAGAAGCTATATCTTCTATATCTAAGGCTATAA GAAGAAGCAGAGCAGGACTTAAAACATCAAAAAGACCTCTTGGAAGTTTTATTTTCCTGGGACCTACAGGTGTTGGTAAA ACTGCTTTAGCTAAAGTTCTTTCAGAGTTTATGTTTGGAGACAGCGATGCTCTTATCAGAATAGATATGAGTGAGTTTAT GGAAAAGTTTGCGGTAAGCAGACTTATAGGAGCTCCTCCTGGATATGTTGGTTATGAAGAGGGAGGCGGACTTACTGAAA AGGTGAGAAGAAAGCCTTATTCTCTTATACTTTTTGATGAAATAGAAAAAGCTCATCCTGATGTTACTAATATACTTTTA CAAGTACTTGAAGAAGGACAGCTTACTGATAATTTTGGAAGAAAAGTTGATTTTTCAAATACTATTATAATAATAACAAG TAACTTAGGTGCAAGAGATATTGTAAAAGGAAGTTCTTTAGGATTTAATGCTGTTGGAAGCGAAAAAGATGCTAATGATA TTAAAAATTTTGCTTTAGAAGAATTAAAACAGAATTTTAATCCTGAGTTTTTAAATAGAATTGATGATATCATAGTATTC CATACTTTAAGTAAAGAGGATTTGAAAGATATTATTAATATAATGCTTAAAGAGCTTAATGAAGCTATTAAAGAAAGAAA TATTGTTATTAATTTAAGCGAAGAAGCTAAGAATTATATCATAGATAAAGGATTCGATAAGAAGTATGGTGCTAGAAGTT TAAGAAGGGCTATACAGAAAGAGATAGAGGATTATGTGAGTACCGAAATATTATTCGGTAATATTGAAGATGGTGATACT ATTAACGTTGATGCTAATGATGGCTCTTTGATATTTTCTTATGATAAGTCAGTTAAGACTGAGAATAAGGAATTATCTAA AAGTTAG Protein sequence : MFQFHLTSKAKKVIELYAQEEAKRLNHDMVTPEHILLGLLHESEALATRVLMRLKIDLDRLKLELESAMVKSSTTKVFGT LPTAPRVQKLISRSAEEARALSHNYIGTEHLLLGLLREESGTAYNVLTSMGLELTILRQEILKMLGVAGSNISSMEQTSQ EDNVKKVKTPTLDQFARDLTKMARDKALDRVIGRENEVMRVVQILSRRKKNNPILLGEPGVGKTAIVEGLAEKIVAADVP DILLKKRVLTLDLSSVVAGTKYRGEFEERIKNIVLEIKKASNIIIFIDELHTLIGAGGAEGALDAANMLKPALSRGEIQC IGATTINEYKKYIEKDGALVRRFQPINVEEPSIEDTIEILNGIKGKYEEHHKVKYTDEAINAAAVLSKRYIFERHLPDKA IDLIDEAGSRARLLNMTRPQEFKDLEKKIEELNQQKKRVVESQNFEDAAKIRDEITSLQEELSKKEEKWREEREKIETFI EEDDIRHVISEITNIPIKRLLNSESKRLIGMEEELHQKVVGQKEAISSISKAIRRSRAGLKTSKRPLGSFIFLGPTGVGK TALAKVLSEFMFGDSDALIRIDMSEFMEKFAVSRLIGAPPGYVGYEEGGGLTEKVRRKPYSLILFDEIEKAHPDVTNILL QVLEEGQLTDNFGRKVDFSNTIIIITSNLGARDIVKGSSLGFNAVGSEKDANDIKNFALEELKQNFNPEFLNRIDDIIVF HTLSKEDLKDIINIMLKELNEAIKERNIVINLSEEAKNYIIDKGFDKKYGARSLRRAIQKEIEDYVSTEILFGNIEDGDT INVDANDGSLIFSYDKSVKTENKELSKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 3e-179 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hlyB | YP_002721411.1 | hemolysin B | VFG0079 | Protein | 0.0 | 54 |
| hlyB | YP_002721411.1 | hemolysin B | VFG0080 | Protein | 4e-137 | 50 |
