Gene Information

Name : fliI (EpC_09360)
Accession : YP_002647965.1
Strain : Erwinia pyrifoliae Ep1/96
Genome accession: NC_012214
Putative virulence/resistance : Virulence
Product : flagellum-specific ATP synthase
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.14
Position : 1081224 - 1082588 bp
Length : 1365 bp
Strand : +
Note : silverDB:cEP00937

DNA sequence : 
ATGACCCGCCATCTGAAAAGCTGGCTGGACACGATTGAACGCACCGAAGCCAAAATGGGCGCAATCCCGGCGTTTCGCCG
TTATGGCCGCCTGACTCGTGCCACCGGCCTGGTGATGGAAGCCGTGGGGCTGAAGTTACCCATTGGGGCAATCTGTGTCG
TAGAGCGCCACACCCGTGACGGTATTATGCCGGTCGAAAGTGAGGTGGTGGGTTTTAAAGACCAGCTGCTTTATCTGATG
CCGCTGGAGCATGTGGATGGCGTGCTGCCAGGCGCGCGCGTGTACGCCCCGGATGGTGACAACGACGAGGGTAAACAGCT
TCCGGTCGGGCCACAGCTGCTTGGCCGGGTGCTGGATGCGCAGGGGCGCCCGCTGGACGGACGTCCGGCACCGTTAAAAA
CCCGCTGCGCCAGCCTGTTCACCCAGCCGATTAACCCGCTGCACCGCGATCCGATCAAAAGCGTGCTCGACGTTGGCGTA
CGCGCCATTAACGGCCTGCTGACCGTCGGGCGCGGGCAGCGTATGGGCCTGTTTGCCGGTTCCGGAGTGGGTAAAAGCGT
GCTGCTGGGCATGATGGCGCGTTTTACCGATGCCGATGTGATCGTCGTCGGGCTGATCGGTGAGCGTGGTCGTGAAGTCA
AAGATTTTATTGAGAACATTCTCGGTGCAGAGGGGATCGAACGCGCGGTAGTGATCGCAGCACCTGCCGATGTGTCGCCT
GTTTTGCGCATGCAGGGTGCGGTCTACGCGACCCGTCTGGCAGAGGATTTCCGCGATCGCGGAATGAACGTGCTGCTGAT
CATGGACTCTCTGACGCGTTTCGCCATGGCACAGCGTGAGGTGGCGTTGGCAATTGGTGAACCGCCGGCAACCAAAGGTT
ATCCGCCATCGGTGTTTGCGCGCCTGCCGGCGCTGGTTGAGCGTGCGGGTAACGGCGTTGCCGGGGGCGGTTCTATCACC
GCTTTTTATACCGTTCTCACCGAAGGCGACGATCAGCAGGATCCGATTGCTGACTCTGCGCGCGCCATTCTCGACGGGCA
TATTGTGCTGTCACGGCGTCTCGCCGAGTCCGGCCACTATCCGGCAATCGATATTGAAGCCTCGATCAGCCGTGCGATGA
CCGAACTTATTCCGCACGCGCAGTACCGCAAGGTGCAAAGCTTCAAGCAGCAACTTTCATCGTATCAGCGCAACAGCGAC
CTGGTGAGCGTGGGGGCTTATGTCAGCGGCAGCGATGCCTTGCTCGATCGTGCCATTGCGCGTTACCCGCAAATGGAAAG
CTTTTTGCATCAGTCGATCCATGAAAGCTGCGGCTATGCAGAAGCCGTTAGCGCACTCTCTACGCTGCTGCCTGACGTAA
CCTGA

Protein sequence : 
MTRHLKSWLDTIERTEAKMGAIPAFRRYGRLTRATGLVMEAVGLKLPIGAICVVERHTRDGIMPVESEVVGFKDQLLYLM
PLEHVDGVLPGARVYAPDGDNDEGKQLPVGPQLLGRVLDAQGRPLDGRPAPLKTRCASLFTQPINPLHRDPIKSVLDVGV
RAINGLLTVGRGQRMGLFAGSGVGKSVLLGMMARFTDADVIVVGLIGERGREVKDFIENILGAEGIERAVVIAAPADVSP
VLRMQGAVYATRLAEDFRDRGMNVLLIMDSLTRFAMAQREVALAIGEPPATKGYPPSVFARLPALVERAGNGVAGGGSIT
AFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAESGHYPAIDIEASISRAMTELIPHAQYRKVQSFKQQLSSYQRNSD
LVSVGAYVSGSDALLDRAIARYPQMESFLHQSIHESCGYAEAVSALSTLLPDVT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 8e-80 48
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 5e-85 47
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-85 47
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-85 47
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 5e-85 47
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 1e-85 46
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 9e-86 46
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-85 46
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-81 46
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-81 46
lscN AAO18044.1 LscN Virulence TTSS locus Protein 2e-78 45
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-73 45
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-73 45
unnamed AAL06369.1 EscN Virulence LEE Protein 3e-71 45
escN AAK26715.1 EscN Virulence LEE Protein 5e-73 44
escN AAL57542.1 EscN Virulence LEE Protein 5e-73 44
escN CAI43874.1 EscN protein Virulence LEE Protein 4e-73 44
escN CAC81862.1 EscN protein Virulence LEE II Protein 4e-73 44
escN YP_003236088.1 translocator EscN Virulence LEE Protein 8e-73 44
escN YP_003223475.1 translocator EscN Virulence LEE Protein 5e-73 44
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 4e-73 44
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 1e-66 43
escN NP_290268.1 hypothetical protein Virulence LEE Protein 2e-72 43
ECs4568 NP_312595.1 EscN Virulence LEE Protein 2e-72 43
escN AAC38383.1 EscN Virulence LEE Protein 3e-72 43
escN AAC31513.1 L0034 Virulence LEE Protein 2e-72 43
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 2e-72 43
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-69 42
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 2e-69 42
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 6e-70 42
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-69 42
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 3e-69 42
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 5e-63 42
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 2e-71 42
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 6e-66 41
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 3e-66 41
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 4e-72 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_002647965.1 flagellum-specific ATP synthase VFG2331 Protein 1e-155 74
fliI YP_002647965.1 flagellum-specific ATP synthase VFG2499 Protein 1e-139 66
fliI YP_002647965.1 flagellum-specific ATP synthase VFG1254 Protein 3e-120 62
fliI YP_002647965.1 flagellum-specific ATP synthase VFG2144 Protein 1e-88 48
fliI YP_002647965.1 flagellum-specific ATP synthase VFG0192 Protein 4e-84 46
fliI YP_002647965.1 flagellum-specific ATP synthase VFG0048 Protein 1e-79 45
fliI YP_002647965.1 flagellum-specific ATP synthase VFG0390 Protein 2e-80 45
fliI YP_002647965.1 flagellum-specific ATP synthase VFG0730 Protein 2e-72 43
fliI YP_002647965.1 flagellum-specific ATP synthase VFG0812 Protein 9e-73 43
fliI YP_002647965.1 flagellum-specific ATP synthase VFG0515 Protein 1e-69 42