Gene Information

Name : nrdE (EpC_09160)
Accession : YP_002647945.1
Strain : Erwinia pyrifoliae Ep1/96
Genome accession: NC_012214
Putative virulence/resistance : Unknown
Product : Ribonucleoside-diphosphate reductase subunit alpha
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0209
EC number : 1.17.4.1
Position : 1063037 - 1065187 bp
Length : 2151 bp
Strand : -
Note : silverDB:cEP00917

DNA sequence :
TTGGCAGCGACAGACAGCACATTCCCAGAGGCCCCGGCGGGCACGGCGGATTATCACGCGCTCAATGCAATGCTCAATTT
GTACGACGACAATGGCCATATTCAGTTTGAAAAAGACAGAGAAGCCGCGCGCCAGTACTTTATTCAACACGTCATCCCCA
ACAGCGTTCAGTTTAACTCCATCGCCGAGCGCCTGCAGTTTCTGGTGGCCGAAGGCTATTACGAAGCTTGCGTATTGAAT
GCCTATCCGTTCGAGTTTGTCTGTTCGCTGTTCGCCCAGGCCGCTGCACGCCGCTTCCGCTTCCAGACATTCCTCGGCGC
ATGGAAGTTTTACACCAGCTATACGTTGAAAACCTTTGATGGCAAACGTTATCTGGAAGGCTTTACCGAACGCGTATGTA
TGGTGGCATTAACGTTAGCCAAAGGTGACCAGCCGCTGGCGCTGGCGCTGACGGATGAAATTCTGAGCGGCCGCTTCCAG
CCGGCAACGCCCACCTTCCTTAACTGCGGTAAGCAGCAGCGCGGTGAGCTGGTCTCCTGCTTCCTGCTGCGAATTGAAGA
CAATATGGAATCGATTGGTCGTGCGGTCAATTCGGCGCTGCAGCTCTCCAAGCGCGGCGGCGGCGTGGCGTTCCTGCTGT
CTAATCTGCGTGAGGCCGGTGCGCCAATTAAGCGCATTGAAAACCAGTCTTCCGGCGTGATCCCGGTGATGAAGATGCTG
GAAGATGCTTTCTCCTACGCTAACCAGCTGGGGGCGCGTCAGGGGGCGGGAGCGGTTTATCTGCATGCGCACCACCCGGA
TATCCTGCACTTCCTTGATACCAAGCGCGAAAACGCCGACGAGAAAATCCGCATCAAAACCCTGTCGCTCGGCGTGGTGA
TCCCCGATATCACCTTCCAGCTGGCCAAAGATAACCAGCCGATGGCGCTGTTTTCACCGTATGACGTTGAGCGAATTTAT
GCTTTGCCGTTCGCCGATATCAGCATGAGCGAAAAGTACCCTGAGATGCTGGCCGATACGCGTATCCGCCGCACCTTTAT
CAACCCGCGTGAATTTTTCCAGACGCTGGCGGAGATCCAGTTCGAGTCCGGTTATCCCTATATCATGTTTGAAGATACGG
TGAACCGGGCGAATCCTGTCCCCGGGCGTATCAATATGAGTAATCTGTGCTCGGAAATTCTGCAGGTCAACAGCCCAACC
GAATATAACGATGACCTGAGCTATCGCCGCATCGGCAAGGATATTTCCTGCAACCTCGGCTCGCTGAATGTCGCCCATGC
GATGGATTCTGCCGATTTTGCCCGCACGGTGGAGATCGCCGTGCGCGGACTGACGGCCGTATCCGATCAAAGCCATATCC
ATTCGGTGCCTTCAATCGAACAGGGCAACGCGCAGTCACACGCCATTGGCCTGGGGCAGATGAACCTGCACGGCTACCTG
GCGCGGGAAGGTATTCAGTACGGATCCGAAGCGGGCCTGGACTTCACTAATATGTATTTCTACACCGTGACTTACCACGC
CCTGCGCACCTCAAACCAGCTGGCGCGTGAACGTGCTACCACCTTTAGCGGCTTTGCGGATTCACGTTATGCCAGCGGCG
AATATTTTAACCAGTATGTCGGGCAACGCTGGCATCCACGTACTGCTCAGGTCGCCGCGCTGTTCGCCAACGCCGGGATT
GCTATCCCATCGCAGCAGCAGTGGCAGGCGCTAAAAGAAGCGGTGATGCAGCACGGGCTGTACAACCAGAATTTGCAGGC
GATCCCGCCGACCGGGTCGATCTCCTATATCAACCACGCCACCTCAAGTATTCACCCGATTGTGTCGCGCATTGAGATCC
GTAAAGAGGGTAAGACTGGCCGCGTCTATTATCCTGCCCCGTTTATGAATAACGATAATCAGGCATTGTATCGTGATGCC
TATGATATCGGGCCGGAAGCGATTATCGATACCTATGCCGAAGCCACCCGCCACGTCGATCAGGGGCTGTCGCTGACGCT
GTTCTTCCGCGATACCGCTACCACGCGCGATATCAATCGTGCGCAAATTTACGCCTGGAAGAAAGGCATTAAAACGCTGT
ACTACATTCGTCTGCGTCAGATGGCCCTGCAGGGCACCGAGGTCGAAGGCTGTGTCTCCTGCTCGCTGTAA

Protein sequence :
MAATDSTFPEAPAGTADYHALNAMLNLYDDNGHIQFEKDREAARQYFIQHVIPNSVQFNSIAERLQFLVAEGYYEACVLN
AYPFEFVCSLFAQAAARRFRFQTFLGAWKFYTSYTLKTFDGKRYLEGFTERVCMVALTLAKGDQPLALALTDEILSGRFQ
PATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKML
EDAFSYANQLGARQGAGAVYLHAHHPDILHFLDTKRENADEKIRIKTLSLGVVIPDITFQLAKDNQPMALFSPYDVERIY
ALPFADISMSEKYPEMLADTRIRRTFINPREFFQTLAEIQFESGYPYIMFEDTVNRANPVPGRINMSNLCSEILQVNSPT
EYNDDLSYRRIGKDISCNLGSLNVAHAMDSADFARTVEIAVRGLTAVSDQSHIHSVPSIEQGNAQSHAIGLGQMNLHGYL
AREGIQYGSEAGLDFTNMYFYTVTYHALRTSNQLARERATTFSGFADSRYASGEYFNQYVGQRWHPRTAQVAALFANAGI
AIPSQQQWQALKEAVMQHGLYNQNLQAIPPTGSISYINHATSSIHPIVSRIEIRKEGKTGRVYYPAPFMNNDNQALYRDA
YDIGPEAIIDTYAEATRHVDQGLSLTLFFRDTATTRDINRAQIYAWKKGIKTLYYIRLRQMALQGTEVEGCVSCSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 0.0 71