Gene Information

Name : EpC_08510 (EpC_08510)
Accession : YP_002647880.1
Strain : Erwinia pyrifoliae Ep1/96
Genome accession: NC_012214
Putative virulence/resistance : Unknown
Product : Rhs family protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3209
EC number : -
Position : 981725 - 986011 bp
Length : 4287 bp
Strand : +
Note : silverDB:cEP00852

DNA sequence :
ATGAGTGAAGCCGCACGCGTTGGCGATGCCACCGGCCATTCCTCCGCGCTGGCCGGGATGATCGGCGGTACGATTGTCGG
CGGGCTGATTGCCGCCGCCGGTGCCGTGGCCGCCGGTGCGCTGTTTGTCGCCGGGCTGGCCTCGGCCTGTCTCGGCGTTG
GCGTGCTGCTGATGGGTGCCAGCCTGGCGGTGGGTTATCTCACCGGGGAGGCGGCCACGGCGGCGCGCGACGGCATGGCC
GCCGCCGGGGCAGCCAGCCTGTCCGCTTCGGGGCAGATACTGACCGGCTCGCCGGACGTGTTTATCAACGGCAAACCGGC
GGCCATCGCCACGGTCAGCCAGGCGGGCTGCGATAAGGACGGGCCGTCGATGCAGATGGCGCAAGGCTCCGACCGGGTGT
TTATCAACGGCCAGCCCGCTTCCCGCGTCGGCGACAAAACCAACTGCGGTGCCACGGTGATGGCCGGCTCGCCCAGCGTG
CACATCGGCGGCGGCACCGCCACCACGCTGGCGATAAAACCCGAAGTGCCGGAGTGGGCCTGCAAGGCCTCTGACCTGAC
GCTGCTGTTTACCGGGCTGCTCGGCGGTGCCGGCGGCGCGGCCGGTAAGGCTGGCAGGCTGGGTAAACTGCTGAGCAGGC
TGCCCGGCATCAGTAAGCTTGCGCAGGTGGCCTGCCGCTTCGGCACCCTGATGACCGCCAGCGCCGCAGCGGGCATCATC
GCCCGCCCGGTGGATATCATCAGCGGGCAGAAATTTCTCTCCGGCGACGACGAGCTGGACTTCGTGCTGCCCTCACGTCT
GCCGGTCGAATGGCAGCGCTACTGGCGCAGCGGCAACCCGGCGGAAAGCGTGCTGGGGCGCGGCTGGAGCCTGTTCTGGG
AAAGCCGCCTGCAGCATTATGATGACGGCCTGGTGTGGCGCGCGCCGTCCGGTGACTTTGTCCCGTTCCCGATGGTGCCA
CGCGGCCGCAAAAGCTGGTGCGAAGCGGAAAAATGCTGGCTGATGCACAATGCCGACGGCAGCTGGCAGGTGTCCGACGT
CAGTGAACAGGTCTGGCACTATCCGCCGCCCGAGGGTAAGCATCCCGCCCGGCTGCACATGCTGACGGACGCCGGCGGTA
ACGCCACCTCGCTGTTTTACGATGAGCAGGGACGGCTGAGCGAACTGGTGGACAGCGCCGGTCAGCGCCTGAGCTGCCGC
TATCTGACCCGCGCCGCCGGGCATGACCGCCTGAGCGCGGTGCTGCTGCACACCCCGGACGGGGAGCGCACGCTGGTCAG
CTACGATTATGACGACGAGGGGCAGCTTGTCACCGTGCGCAACCGCGCCGGCGAGGTGACGCGCCGCTTCAGCTGGCGCG
ACGGGCTGATGGCCAGCCACCAGGACGCCAACGGGCTGCTGAACGAATATCTGTGGCAGGAGATTGACGGCCTGCCGCGC
GTCACCGGCTGGCGGCACAGCGCCGGGGAAGAGCTGGCGCTGCACTACGACTTTAGCGGCGGCACGCGCCGGGCGGTGCG
CGACGACGGCATGCAGGCGTGGTGGCAGCTGGACGACGACGACAGCGTGGCGCAGTTCACCGACTTTGACGGCCGCCGGC
TGGCGTTTGTCTACGCCCGCGGCGAGCTGTGCAGCGTGCTGCTGCCGGACGGCGGCCAGCGTCAGAGCGAGTGGGACCGC
TACGGGCGACTGCTGAGCGAAACCGACCCGACCGGGCGCAAAACCCTTTACCAGTACCAGCGTAACAGCGACCGGCTGGT
CTGTGTCACCCACCCCGACGGCAGCCGCGAGAGCCGGTCATGGGACCGCCAGGGGCGCCTGATTAAACAGACTGACGCGG
CAGAAAACACCACGCTTTACCACTACCCGGACGAAGAAGAGAGCCTGCCGGCGCGCATCACCGATGCCTCCGGCGGCGTG
GTGCAGCTTGAGTGGAACGGCCGGGGGCTGCTGACGCGCCATACCGACTGTTCCGGCAGCGTCACCGCCTATGGCTATGA
CGTTTTCGGCCAGCTCACCGACCGTACCGATGCGGAAGGCAGTGTGACCCGCTACCGCCGGGATGCCGCCGGTCGCCTGC
ACACCCTGCACCACGCGGACGGCAGCGAAGAGCATTTCACCTGGAACGAACGCGGGCAGCTGGTGCGGCATCAGGACCCG
CCCGGCAGCGAGACGCACTGGCGCTACAACCTGCTGGGCCAGCCGGTCAGCATCACCGACCGCATCAACCGCACGCGAAA
CTGGCACTACAACCCGCGCGGCTGGCTGACGCGGCTGGAGAACGGCAACGGCGGCGAGTATCAGTTCAGCCACGATGCCG
CCGGGCGCATCACCGCCGAACGGCGTCCGGACAACACCGACCACCTGTACCGCTACGGCCCGGACGGCCAGCTGGCCGAA
CACCGGGAAACCGGCCCGCAGAACAGCCTTGCGCCGCCCGCGCACCGCCTGCACCGCTTCCGCTTTGACGGGGCGGGTCG
CCCGGCATGGCGCGGCAACGACAGCGCCGAATGGCAGTATCACTACGATGCCGCCGGCAGGCTGAGCCTGCTCACGCGTA
CCCCCACCGCCGCCGGGGCGGAGGCGGGGATTGAAGCGGACCGCATTGAGCTGCAGTACGACCGGGCGGGCAACCTGCTG
TGCGAGCGCGGCGTGAACGGCGGGCTGCACTACCAGTGGGACGCGCTGGCTAACCTGCAGGCGCTGACGCTGCCGCAGGG
CGACAGCCTGCAGTGGCTGCACTACGGCTCCGGCCACGTCAGCGCGCTGAAGTTCAACCGGCAGCGGGTCAGTGAATTTA
CCCGTGACCGCCTGCACCGCGAAACCGGGCGCAGCCAGGGCGCGCTGCACCAGCAGCGGCGCTACGATGCGCTGGGCAGG
CGCAGCTGGCAGAGCAGCGCCTTCAGTGACGGGAAGATAACCCGGCCGGAGGACGGTATTCTGTGGCGGGCATTCCGCTA
TACCGGGCGCGGCGAGCTGGCGGGCATCAGCGATGCGCTGCGCGGCGAGGTGCACTACGGCTACGACGCCGAAGGCCGCC
TGTTGCAGCACCGCGAGCTGAAGTCCGGCAGGGTTGGCAACCGGCTGCTGTATGACGCCGCCGATAACCTGCTGGGCGGG
CAAAGCCCGCACGACGACCCGGCACAGCCGCCGCCGCCGCCGCTGAGCAGCAACCGCCTGCCGCACTGGCAGCGGCTGTT
CTACCGCTACGACGTCTGGGGCAATCTGGTCAGCCGCCGCCACGGCGTCAACGAACAGCATTACACCTACGACGCCGACA
ACCGCCTGATACACGCGCGCGGCTTCGGTCCGCAGGGCGAATTCAGCGCGCGGTATCACTATGACGCGCTGGGCAGGCGC
AGCCGCAAGGAGGTCACCTTCGCGGGCAAAGCGCCGCAGACCACGCGCTTCCTGTGGCAGGGCTACCGGCTGCTGCAGGA
GCAGCGCGGCAACGGCACGCGCCGCACCTGGAGCTACGACCCGGCCAGCCCGTGGACGCCGCTGGCGGCCATCGAACAGG
CGGGTGACGCTGAGCAGGCCGATATTTACTGGCTGAACGCCGACCTCAACAGCGCGCCGCTGGAGGTCACCGACGCAGAG
GGCAATCTGCGCTGGTCGGGACAGTACGACACCTTCGGCAAACTGCTGGGCCAGACGGTCGCCGGGGCGGCACAGCGCAC
GGGGCCGGTCTACGATCAGCCGCTGCGCTACGCCGGGCAGTACCAGGACAACGAGAGCGGACTGCACTATAATCTGTTCC
GTTTTTACGAGCCTGATGTAGGAAGATTCACGACCCAGGATCCAATTTCTATCCGTGGCGGACTGAACCTGTATGCTTAT
GCACCGAATCCGTATGGGTGGGTGGATCCGCTGGGGCTGAGCAATTTCTTTATACCATCGGTATTCAATGCTCCGTCCGG
TAGTACACATACTGTTTACCAGCAAAAAATCGATTGGGATTTACCTGTCAACACACGAAGTGGAGTTAAAACAAATCTGG
ATTTAGCGTTAGATGGTAAAAGTCCATTTGTGGTTAAAAATGGAAAGTACTCCCAGATAAATCTACATCACTCGAAGCAA
GATGGATTAGGATCATTGTTTGAACTTTCAGCAGCTACTCATCAGAAATACTATGGGACGAATGCATTACATCCGTACTT
ACCTAATCCGCATCCAATAAATCCCGTCAACAGAGATAGTTTTAATGGCGATCGTGATAGTTATTGGCGACAGCGCGGCG
AAAGTGAACTACATAGCCGAAGATTAAAAACTAACTGTAGAGGTTAA

Protein sequence :
MSEAARVGDATGHSSALAGMIGGTIVGGLIAAAGAVAAGALFVAGLASACLGVGVLLMGASLAVGYLTGEAATAARDGMA
AAGAASLSASGQILTGSPDVFINGKPAAIATVSQAGCDKDGPSMQMAQGSDRVFINGQPASRVGDKTNCGATVMAGSPSV
HIGGGTATTLAIKPEVPEWACKASDLTLLFTGLLGGAGGAAGKAGRLGKLLSRLPGISKLAQVACRFGTLMTASAAAGII
ARPVDIISGQKFLSGDDELDFVLPSRLPVEWQRYWRSGNPAESVLGRGWSLFWESRLQHYDDGLVWRAPSGDFVPFPMVP
RGRKSWCEAEKCWLMHNADGSWQVSDVSEQVWHYPPPEGKHPARLHMLTDAGGNATSLFYDEQGRLSELVDSAGQRLSCR
YLTRAAGHDRLSAVLLHTPDGERTLVSYDYDDEGQLVTVRNRAGEVTRRFSWRDGLMASHQDANGLLNEYLWQEIDGLPR
VTGWRHSAGEELALHYDFSGGTRRAVRDDGMQAWWQLDDDDSVAQFTDFDGRRLAFVYARGELCSVLLPDGGQRQSEWDR
YGRLLSETDPTGRKTLYQYQRNSDRLVCVTHPDGSRESRSWDRQGRLIKQTDAAENTTLYHYPDEEESLPARITDASGGV
VQLEWNGRGLLTRHTDCSGSVTAYGYDVFGQLTDRTDAEGSVTRYRRDAAGRLHTLHHADGSEEHFTWNERGQLVRHQDP
PGSETHWRYNLLGQPVSITDRINRTRNWHYNPRGWLTRLENGNGGEYQFSHDAAGRITAERRPDNTDHLYRYGPDGQLAE
HRETGPQNSLAPPAHRLHRFRFDGAGRPAWRGNDSAEWQYHYDAAGRLSLLTRTPTAAGAEAGIEADRIELQYDRAGNLL
CERGVNGGLHYQWDALANLQALTLPQGDSLQWLHYGSGHVSALKFNRQRVSEFTRDRLHRETGRSQGALHQQRRYDALGR
RSWQSSAFSDGKITRPEDGILWRAFRYTGRGELAGISDALRGEVHYGYDAEGRLLQHRELKSGRVGNRLLYDAADNLLGG
QSPHDDPAQPPPPPLSSNRLPHWQRLFYRYDVWGNLVSRRHGVNEQHYTYDADNRLIHARGFGPQGEFSARYHYDALGRR
SRKEVTFAGKAPQTTRFLWQGYRLLQEQRGNGTRRTWSYDPASPWTPLAAIEQAGDAEQADIYWLNADLNSAPLEVTDAE
GNLRWSGQYDTFGKLLGQTVAGAAQRTGPVYDQPLRYAGQYQDNESGLHYNLFRFYEPDVGRFTTQDPISIRGGLNLYAY
APNPYGWVDPLGLSNFFIPSVFNAPSGSTHTVYQQKIDWDLPVNTRSGVKTNLDLALDGKSPFVVKNGKYSQINLHHSKQ
DGLGSLFELSAATHQKYYGTNALHPYLPNPHPINPVNRDSFNGDRDSYWRQRGESELHSRRLKTNCRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api89 CAF28563.1 putative membrane-bound sugar-binding protein Not tested YAPI Protein 0.0 47
YpsIP31758_3692 YP_001402646.1 RHS/YD repeat-containing protein Not tested YAPI Protein 0.0 46