Gene Information

Name : outE (EpC_07680)
Accession : YP_002647798.1
Strain : Erwinia pyrifoliae Ep1/96
Genome accession: NC_012214
Putative virulence/resistance : Virulence
Product : general secretion pathway protein E
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 888620 - 890086 bp
Length : 1467 bp
Strand : -
Note : silverDB:cEP00769

DNA sequence :
ATGAACCAGCCACTTTTTCCCTTCAGCTGGGTACAGCAGCATAACGTACTGCTGCTACCGGATGGCGAATCCGTGGCGCT
GTGCTTCCATTCCGGCAGCAGTATGTCTGCCATTCTGGAAGCACGCCGCCATGCCCCTGAAGCCAGTCTGCAGTTGCTTG
CCGAAGACATTTTTCGTCAGAAGATGAGCGATGCCTATCAGCAAAACGCCTCCTCAACGCAGGTGTTTGAAACGCTGGGT
AGCGAGTTTGATCTTGATCAGCTGGTGGATGGGCTGCCCGAGGATAACGATTTGCTCGACAGCGACGATGGCGCCCCGGT
TATCCGCCTGATCAATGCCATCCTCAGTGAGGCTATCAAAGAAGGGGCATCCGATATTCATATCGAGCCATTTGAGAAGA
AGCTGAGCGTACGCTTCCGCATTGACGGCATGCTGCGCACTATCCTGTCCCCTCCGGCACAGCTCAGTCGTTACCTGTTA
TCGCGTATTAAAGTCATGGCAAAGCTTGATATTGCGGAAAAACGCATCCCGCAAGATGGGCGTATTTCTCTGCGTCTGGG
CGGCAGAAATATCGACGTGCGCGTCTCAACCCTGCCTTCGCGTCACGGTGAGCGCATCGTGCTGCGCGTACTGGATAAGA
ATGGACTGACGCTGAACCTGGCTGATATCGGCATGTCACCGCAGGCGGAGCAGGCGATGAATCGTCTGCTGAAGACGCCG
CACGGCATCCTGCTGGTGACCGGGCCAACCGGTTCGGGGAAAAGTACCACGCTGTATGCCGGGCTTAAGCTTATCCACAG
CGACGACAAAAATATCATGACCATTGAAGATCCGGTGGAGTACGAACTGGAAGGGATTGGACAGACGCAGGTCAACAGCA
AAGTGGATATGACATTCGCCCGTGGTCTGCGCGCCATTCTGCGCCAGGACCCGGATATCGTGATGATTGGTGAGATCCGC
GACGGCGAAACCGCGCAGATCGCCGTTCAGGCTTCACTCACCGGGCACCTGGTGCTCTCCACGCTGCATACCAACAGCGC
TTTCGGTGCTATTGAGCGCCTGCGCGATATGGGGGTCGAACCCTTTCTGCTCGCCAACTCGCTGATTGGCGTGCTGGCTC
AGCGCCTGGTACGCAGGCTGTGTCCCGCCTGCCGTCAACCGGGTGCGGCAACCGCTGTTGAGCTGGCGCATTTTTCCCCC
AGCCCGCCATCGGGCATTCAGCTGTGGCGCGCTGTCGGCTGCGAAAAGTGTAATAACAACGGCTATCGTGGGCGTGTCGG
CATTTATGAATTGCTGACGATTGATGATGCGCTCCGCCAGGCGATTGGCCAGAACAAGAGCGAAAACGAGCTGAGCCAGC
TGGTGAACGCTGACTATTGCTCTTTACAACAGGACGGCCTGCAAAAGGTGCTCACCGGCATGACCACGCTCGAAGAGATC
CTTCGCGTCACGCGTGAGGCGCATTGA

Protein sequence :
MNQPLFPFSWVQQHNVLLLPDGESVALCFHSGSSMSAILEARRHAPEASLQLLAEDIFRQKMSDAYQQNASSTQVFETLG
SEFDLDQLVDGLPEDNDLLDSDDGAPVIRLINAILSEAIKEGASDIHIEPFEKKLSVRFRIDGMLRTILSPPAQLSRYLL
SRIKVMAKLDIAEKRIPQDGRISLRLGGRNIDVRVSTLPSRHGERIVLRVLDKNGLTLNLADIGMSPQAEQAMNRLLKTP
HGILLVTGPTGSGKSTTLYAGLKLIHSDDKNIMTIEDPVEYELEGIGQTQVNSKVDMTFARGLRAILRQDPDIVMIGEIR
DGETAQIAVQASLTGHLVLSTLHTNSAFGAIERLRDMGVEPFLLANSLIGVLAQRLVRRLCPACRQPGAATAVELAHFSP
SPPSGIQLWRAVGCEKCNNNGYRGRVGIYELLTIDDALRQAIGQNKSENELSQLVNADYCSLQQDGLQKVLTGMTTLEEI
LRVTREAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 1e-123 60
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-123 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
outE YP_002647798.1 general secretion pathway protein E VFG0182 Protein 2e-132 59
outE YP_002647798.1 general secretion pathway protein E VFG2048 Protein 5e-125 59
outE YP_002647798.1 general secretion pathway protein E VFG1876 Protein 6e-120 51
outE YP_002647798.1 general secretion pathway protein E VFG2426 Protein 2e-79 47
outE YP_002647798.1 general secretion pathway protein E VFG1880 Protein 2e-82 45