Gene Information

Name : vasA (EpC_06340)
Accession : YP_002647666.1
Strain : Erwinia pyrifoliae Ep1/96
Genome accession: NC_012214
Putative virulence/resistance : Virulence
Product : type VI secretion system family protein, VCA0110
Function : -
COG functional category : S : Function unknown
COG ID : COG3519
EC number : -
Position : 733965 - 735839 bp
Length : 1875 bp
Strand : +
Note : silverDB:cEP00635

DNA sequence :
ATGGACAGTAAGCAGCTCGACTATTACAACCGTGAACTGGCGTATCTGCGCGAAATGGGCGCGGAGTTTGCCGGGCGCTA
TCCAAAGGTGGCAGGCCGTCTTGGCATGCGCGGCGATGAGGTGGCCGACCCCTACGTTGAGCGGCTGATGGAGGGCTTTG
CCTTTCTCACCTCACGCGTGCAGCTGAAAATGGACGCCGAGTTTCCGCGCTTCTCCCAGCGCCTGCTGGAGATGATTGCG
CCGAACTACCTGTCGCCAACGCCGTCGATGGCGATAGCCGAACTGCAGCCGGACAGCCGCAAAGGCGATATCAGCAACGG
TTTTCTGGTGCCGCGCGGCACCATGATGGACAGCCAGGCGCTAAAGCAAAACGGCGTCACCTGCAGTTACACCACCGCCC
ATGACGTGATGCTGCAACCGGTGCGCATCAAAAGCGTTGAGCTGGGCGGCATTCCGGCCAACGTCCCGCTCGGCGAACTG
GGGTTAAGCCAGCGCGGCGCGGTCAGCGCCCTGCGCATCCGCATCGCCTGTGACGAGAGCATCACGCTTGCACATCTTAG
CTTCGACAGCCTGATGTTCTTCCTCAGCGGGCCGGATATGCAGGCGCTGCAGCTGCTGGAGCTGGTGATGCAGCACTACG
TGGGCGGCTACTGCCAGAGCGTGGGCAGCAGCCCGCAGCGCACGCTACTGGGCGATGATGCGCTCCAGCAGGAAGGGTTT
GCCGCAGACCAGGCGCTGCTGCCAAACGATCTGCGTAATTTCGATGGCTATCGCCTGTTGCAGGAGTACTTCGCCTTCCC
GGCCCGCTTCCAGTTTATCAGCATCAGCCAGCTGCGCCCGCTGTTACAAGCCTGTGACCCACAGGCGCGTGAATTCGATA
TCGTGCTGCTGCTGGACAGCGCCAACCCGGGGCTGGAGCGGGTGATTGACCACAGCCATCTGGCGCTGCACTGCACCCCG
GTAATCAACCTGTTTCCGAAAGTGGCGCAGCGGCAAAAGCTCAGCGACAGCGTGCACGAATATCATCTGGTGGTGGATAA
CATCCGCCCGCTGGACTACGAGATTTTCTCGGTGCAGAAGCTATACGCCAGTGGCGAGCGCCAGCGCGAGGAGCAGCAGT
TCCGCCCGTTCTGGAGCACCTTCAGCGATGACGGCGGTAACTACGGGGCTTACTTCTCGCTGCGGCGCGAACAGCGCACC
CTGTCCGAACATGCGCAGCGCTTCGGCACGCGCACCGGCTACGTCGGGTCGGAAGTGTTTCTGTCGCTGGTCGACGAGCA
CAATTCGCCCTGGCATGAGGATCTGCGCTATCTGACTGCCGAGGTGATGTGTACCAGCCGCGATCTGCCGCTACTGCTGC
TGCAACAGCAGGGGCAGTTTGTGATGCCTGATTCGATCCCGGTGCGCCAGCTTACGCTGCGTAAAGGGCCGACGCCGCCA
CGTCCGGCGCTGGCCGAGGGAAAAATGGCCTGGCGGCTGGTCAGCCATTTGCAGATGAACTATCTCAGCCTGATGGACGG
TGATGACGGGCAGGGGGCGGCGGCGTTACGCCAGATGCTCGGGCTTTACGCTAATCTCGCCGAAGCCGCTGCGGCGCGCC
AGATCGACGGTATTCGCCACTGCCAGCTGAAGCCGGTGTTCCGGCGCGTGCCGGAGCCTGGCCCGATTGTCTTTGCCCGT
GGCATCGGCATTGAGCTGGAGGTGGACGAGCAGGCGTTTTCCGGCAGCAGCCCGTGGCTACTCGGCAGCGTGCTGGAGCG
GGTGTTCTCGCGGCTGGTGGCGATCAACACCTTTACCGAAATGACGCTGACCAGCCAGCAGCGCGGCGAGGTCGGCTACT
GGGCGCCGCGCATGGGCAAAAGGACACTGATATGA

Protein sequence :
MDSKQLDYYNRELAYLREMGAEFAGRYPKVAGRLGMRGDEVADPYVERLMEGFAFLTSRVQLKMDAEFPRFSQRLLEMIA
PNYLSPTPSMAIAELQPDSRKGDISNGFLVPRGTMMDSQALKQNGVTCSYTTAHDVMLQPVRIKSVELGGIPANVPLGEL
GLSQRGAVSALRIRIACDESITLAHLSFDSLMFFLSGPDMQALQLLELVMQHYVGGYCQSVGSSPQRTLLGDDALQQEGF
AADQALLPNDLRNFDGYRLLQEYFAFPARFQFISISQLRPLLQACDPQAREFDIVLLLDSANPGLERVIDHSHLALHCTP
VINLFPKVAQRQKLSDSVHEYHLVVDNIRPLDYEIFSVQKLYASGERQREEQQFRPFWSTFSDDGGNYGAYFSLRREQRT
LSEHAQRFGTRTGYVGSEVFLSLVDEHNSPWHEDLRYLTAEVMCTSRDLPLLLLQQQGQFVMPDSIPVRQLTLRKGPTPP
RPALAEGKMAWRLVSHLQMNYLSLMDGDDGQGAAALRQMLGLYANLAEAAAARQIDGIRHCQLKPVFRRVPEPGPIVFAR
GIGIELEVDEQAFSGSSPWLLGSVLERVFSRLVAINTFTEMTLTSQQRGEVGYWAPRMGKRTLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0289 NP_454871.1 hypothetical protein Not tested SPI-6 Protein 6e-117 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vasA YP_002647666.1 type VI secretion system family protein, VCA0110 VFG2074 Protein 3e-123 45