Gene Information

Name : Hcp (EpC_06240)
Accession : YP_002647656.1
Strain : Erwinia pyrifoliae Ep1/96
Genome accession: NC_012214
Putative virulence/resistance : Virulence
Product : secretion apparatus virulence factor
Function : -
COG functional category : S : Function unknown
COG ID : COG3157
EC number : -
Position : 723971 - 724453 bp
Length : 483 bp
Strand : +
Note : silverDB:cEP00625

DNA sequence :
ATGGCTATTGATATGTATTTGAAAGTTGACGGTGTTACCGGTGAATCTAAAGATGCTAACCACACCGGCTGGATCGATGT
GACTTCTTTCTCCTGGGGCGCTACCCAGCCGGGCAACATGTCCGTAGGCGGCGGCGGCGGTGCCGGTAAAGTGAACTTTA
ACGATCTGCACGTTGATGCAAAAATCGATAAAGCAGTTACCGCGCTGCTGAAAAACTGCGCCAGCGGTAAGCACGTCGGT
AAAGTAGAAGTTTCCGTATGTAAAGCGGGCGGCACTCAGATTGAGTACACCCGTATTACTCTGGAAGACGTGCTGGTAAC
CCGCGTCGAGTTCTCGGGTGCAGGAAACGGGGAAACTTTGGGCGTAACCTACGCATTCCAGGCTGCCAAAGTGAAACAGC
AGTACTGGGAGCAGAGCACCACCGGTGGTAAAGGCGCAGAAAGCAGCGCTGGCTGGAATATTAAAGAGAATAAAGAAGCG
TAA

Protein sequence :
MAIDMYLKVDGVTGESKDANHTGWIDVTSFSWGATQPGNMSVGGGGGAGKVNFNDLHVDAKIDKAVTALLKNCASGKHVG
KVEVSVCKAGGTQIEYTRITLEDVLVTRVEFSGAGNGETLGVTYAFQAAKVKQQYWEQSTTGGKGAESSAGWNIKENKEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0302 NP_454882.1 conserved hypothetical protein Not tested SPI-6 Protein 3e-19 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hcp YP_002647656.1 secretion apparatus virulence factor VFG2071 Protein 4e-17 45