Gene Information

Name : EpC_04610 (EpC_04610)
Accession : YP_002647498.1
Strain : Erwinia pyrifoliae Ep1/96
Genome accession: NC_012214
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 548805 - 549689 bp
Length : 885 bp
Strand : +
Note : silverDB:cEP00462

DNA sequence :
GTGGCAAAACTGAATAAAAATTTGATGACGCTGGCAAGGCAGGCCGGCGGAAGTTTTAAAACCGTCTCCGATCGCATGAA
AATAGCTGACCGTTTTGCTGAACGGCTGCTGAAGCTTAATATTCAGATCAGGGACGTGAAAAATATCAAAACCGGCCACG
TTGAATTATATATTCGCAGTCGGCTTACTGAGAATATCTCTAAACGAACGCTACAAAATGAGATGGCCGCCATCCGTGCT
TTACTGCGCGTTGCCGGAAAAACCTTTATGGCAGATCCCTCACATGAAAAACTGAGCAATGAAGCGCTTAATATTTCAGG
TACAAGCCGTGACGGGACAAAAGTTGCTATTACGGATGATTATTACCGCCAGGTTCTTTCTTCAGCAGAGGAGAAAGATA
AAGGCGTTGCCTGTGCCATAAGATTATCCCGTCTTTTAGGGTTGAGAACGGAAGAAGCGGTGCAGTCTGTAAAGTCACTG
CGAACATGGCAAAAGAACCTCGACAATAACGAGGGAAAAATTCGTGTCGTTTTTGGTACGAAAGGTGGGCGGGCAAGAGA
TACGACCATCATAAAGAGAGAAGAAACCATTCAGGCAATCAGGCAGGCTATACAATATGCTGAAGAAAATAACGGCCGCT
TAATTAATAAGTCTTCATTACATCTCGCCATTGAGCGATACAGAAATATCGCACGCGATGCCGGTCTGGTGGGCGAATTT
GCACCGCACAGCCTGCGCTATGCCTATACGCAGGATGTGACCGCATTTCACCTTAATAAAGGGTTCAGTCTTAAAGAAGC
GCAGGCGCTGGCATCTATGGATTTAGGTCATGGCGACGGAAGAGGGCATTATATCGCACGCGTTTATAATAAGACCAAAA
ATTAG

Protein sequence :
MAKLNKNLMTLARQAGGSFKTVSDRMKIADRFAERLLKLNIQIRDVKNIKTGHVELYIRSRLTENISKRTLQNEMAAIRA
LLRVAGKTFMADPSHEKLSNEALNISGTSRDGTKVAITDDYYRQVLSSAEEKDKGVACAIRLSRLLGLRTEEAVQSVKSL
RTWQKNLDNNEGKIRVVFGTKGGRARDTTIIKREETIQAIRQAIQYAEENNGRLINKSSLHLAIERYRNIARDAGLVGEF
APHSLRYAYTQDVTAFHLNKGFSLKEAQALASMDLGHGDGRGHYIARVYNKTKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3461 YP_001007623.1 putative phage integrase Not tested YAPI Protein 2e-99 73
YpsIP31758_3697 YP_001402651.1 hypothetical protein Not tested YAPI Protein 2e-101 71
api85 CAF28559.1 putative integrase Not tested YAPI Protein 9e-70 67
PMI2564 YP_002152283.1 hypothetical protein Not tested Not named Protein 6e-73 57
SESS1296_03610 AFO66305.1 putative DNA binding protein Not tested SESS LEE Protein 4e-64 53
SESS1635_03828 AFO66378.1 putative DNA binding protein Not tested SESS LEE Protein 4e-64 53
STY4676 NP_458755.1 hypothetical protein Not tested SPI-7 Protein 2e-53 49
t4367 NP_807960.1 hypothetical protein Not tested SPI-7 Protein 2e-53 49
STY4586 NP_458670.1 hypothetical protein Not tested SPI-7 Protein 6e-55 46
t4280 NP_807878.1 hypothetical protein Not tested SPI-7 Protein 6e-55 46