Gene Information

Name : yrbH (EpC_03350)
Accession : YP_002647372.1
Strain : Erwinia pyrifoliae Ep1/96
Genome accession: NC_012214
Putative virulence/resistance : Virulence
Product : D-arabinose 5-phosphate isomerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : 1.1.1.205
Position : 405376 - 406362 bp
Length : 987 bp
Strand : -
Note : silverDB:cEP00335

DNA sequence :
ATGGCGCATATCACTGCCGAAAACGACTTTGATTTTCAACAGGCCGGGAAAGAGGTCTTGCAGATTGAACGCGAAGGTCT
GGAACAACTCGACCGCTACATTAATGATGACTTTACCCATACCTGCGATCTGATTTATCGCTGTCGCGGCAAAGTAGTGG
TCATGGGGATGGGCAAATCAGGGCACATTGGCAAAAAAATTGCCGCCACTTTTGCCAGTACCGGTACGCCCGCGTTCTTT
GTTCATCCTGCTGAAGCCAGCCACGGCGATCTGGGCATGGTGACGTCTGACGATGTGGTGATTGCCATTTCCAATTCCGG
CGAATCTTCAGAGATTTTGGCCCTGATCCCGGTACTGAAGCGCCTGCACGTCACATTAATCTGCATCACCAGCCGCCCGG
AGAGTGCAATGGGGCGTGCGGCAGATATCCATCTGTGTGTTAAAGTCCCCCAAGAGGCCTGCCCACTTGGCCTGGCGCCG
ACCACCAGTACCACCGCCACGCTGGTGATGGGCGATGCACTGGCCGTTGCACTATTAAAAGCCCGTGGTTTTACCCAGGA
AGATTTTGCCCTCTCTCACCCCGGTGGCGCGCTGGGGCGCAAGCTGCTACTGCGTGTTGATGATATCATGCACTGTGGTA
ATGCTATGCCACACGTCAGCCGTGACGCCTCACTGCGCGACGCCCTGTTGGAGATTACGCAGAAAAACATGGGGATGACG
GTGATTTGTGACGCTTCGATGCAAATCGAGGGTATTTTCACCGACGGTGATTTACGCCGCGTCTTCGATATGGGCATTGA
TATCCAGCACGCCAGTATTGAAAGTGTGATGACGCCGGGCGGCATTCGCGTGCGGCCTGGTACGCTGGCAGTGGATGCAC
TAAATCTGATGCAAACCAGGAATATCACCTGCGTCATGGTTGCCGACAACGATCGGCTAATTGGCGTGATCCATATGCAT
GACATGCTGCGCGCTGGCGTAGTTTAA

Protein sequence :
MAHITAENDFDFQQAGKEVLQIEREGLEQLDRYINDDFTHTCDLIYRCRGKVVVMGMGKSGHIGKKIAATFASTGTPAFF
VHPAEASHGDLGMVTSDDVVIAISNSGESSEILALIPVLKRLHVTLICITSRPESAMGRAADIHLCVKVPQEACPLGLAP
TTSTTATLVMGDALAVALLKARGFTQEDFALSHPGGALGRKLLLRVDDIMHCGNAMPHVSRDASLRDALLEITQKNMGMT
VICDASMQIEGIFTDGDLRRVFDMGIDIQHASIESVMTPGGIRVRPGTLAVDALNLMQTRNITCVMVADNDRLIGVIHMH
DMLRAGVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 3e-49 42
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 9e-50 42
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 2e-49 42