Gene Information

Name : EpC_35330 (EpC_35330)
Accession : YP_002650514.1
Strain : Erwinia pyrifoliae Ep1/96
Genome accession: NC_012214
Putative virulence/resistance : Virulence
Product : DNA methylase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0286
EC number : -
Position : 3849022 - 3851403 bp
Length : 2382 bp
Strand : -
Note : silverDB:cEP03534

DNA sequence :
ATGGATCACAGCGTACACAACAAACTGATTTCTTTTATCTGGAACATCGCCGACGACTGCCTGCGTGATGTGTATGTTCG
GGGTAAATATCGTGACGTCATTCTGCCTATGGTGGTACTGCGTCGTCTTGATACCCTGTTAGAGCCGGGCAAAGAGGCCG
TGCTGGCTGAAGTCAAGTTTCAGAAAGAAGAACTACGGGCAACTGAACTGGATGATGCGCCACTCATGGCGGCCAGTGGC
TATGTGTTTTACAACACTTCAAAGTGGACGTTAAATTTGCTGTTCAAGGCGGCGACCAACAACCAGCAGATCCTGTTGGC
GAACTTTGAAGAGTACCTGCTGGGCTTCAGTGACAACGTTAAAGAGATCGTCGCCTGCTTTAACCTGCAGGCACAAATCC
GCCATATGGCGTCGAAGCAGGTGCTGCTGGATGTGGTGGAAAAGTTCGTCTCGCCTTATATCAACCTGACGCATAAAGCC
GTGGAAGACCCCGAAGGCTACACTATGCCAGCCCTGTCAAATTTGGGCATGGGCTACGTCTTTGAAGAGCTTATTCGTAA
ATTTAACGAAGAAAATAACGAAGAGGCCGGGGAGCACTTCACGCCAAGGGAAGTGATCGACCTGATGACGCACCTGGTAT
TTGACCCGGTGAAAGACAAATTGCCGCTAACGATGACGGTATACGATCCGGCCTGCGGTAGCGGCGGTATGCTGACCGAA
TCGCAGAACTTTATCGAAGCAAAATACCCCAGCAGCAATCGTGATATTTACCTGTACGGTAAAGAGATCAACGACGAAAC
CTATGCTATCTGTAAGTCAGATATGATGATCAAAGGCAACAACCCCGAGAACATCCGGGTGGGTTCAACGCTATCGACCG
ATGAATTTGCCGCAGAGCGTTTTGACTTTATGCTGTCAAACCCGCCCTATGGCAAAAGCTGGGCCTCTGAGCAGAAGTAC
ATCAAAGATGGCGGCGATGTGATTGACCCACGCTTTAAGGTCCGGCTGCAGGACTACTCGGGCAAAGAAGAGACGGTGGA
TGCCACGCCGCGCTCCAGTGACGGACAGCTGCTGTTCCTGATGGAAATGGTCAGCAAAATGAAAGACCCGGCGATCGGCT
CGCTGGGCAGTCGCATTGCCTCGGTGCACAACGGATCTTCTCTTTTCACCGGTGATGCCGGCGGTGGTGAAAGTAATATC
CGCCGTTACCTGATTGAAAACGATATGCTGGATGCTATCGTGCAGCTGCCCAATAACCTGTTCTATAACACCGGTATCAC
CACCTATATCTGGCTGCTGAATAATAACAAACCGCAGGATCGCCAGGGCAAGGTGCAGCTGATTGATGCCAGCCTGCTGT
ATCGCAAACTGCGCAAGAACCTCGGCAATAAAAACTGCGAGTTTGCCCCCGAACATATTGCCGAGATCGCGCAAACCTAC
CTCGCTTGTGCCGGGGTGGAAAGAAAACTGGACGCTAACCACGATGCCGTGGGTATTGCCAGCAAGGTATTCAGTAACGA
TGACTTTGGCTATTACAAGGTCACCGTCGAGCGCCCAGACCGGCGTAAGGCCCGCTTTACCCGTGAGGCCATTCAGCCGC
TGCGCTTTGATAAACAGCTTGCCGAGGTGATGGCCTGGCTGTATGGCGAACACGGTGACAAAATCTACGAAAAGGGCTTT
TTAGCCTCGGTCGAAAAAGCCACGCTGGCCTGGTGCGCAGAGCGCGATATCAGTCTGAATACTAAGGCCAAAAGCAAGCT
GCTCGACGTGAAAAACTGGCTGTCGTTGCAGAGGGTGTATCACACCGCTGAACGGCTGATGGCCACCCTCGGCGGCGGCG
AATTTGACGATTTCAACCTGTTCAAAGCGCAGGTTGAACAGGTGCTGAAAGCGGAAAAAATCAAGCTGTCTGCGGCTGAG
AAGAACGCGATTGTAAACGCGGTAAGCTGGTATGACGAGACGGCGGCCAGAGTCATCAATAAAACGGTGAAGCTGAACGG
CGATAAGCTACAGGACCTGTTAGCACGCCTGGAATGTGAAGCGGAAGATCTGCCTGATTTTGGTTTTTACCCCAGCGGCA
AAAAAGACGAATATATTATTTACGACAGCAGTGCAGATCTGCGTGATACGGAATCAGTACCGCTTAAGCAAAGTATTTAC
CAGTATTTCCTCGATGAAGTGAAGCCGCATGTGGCAGAGGCCTGGATTAATCTGGACTCGGTGAAAATTGGCTACGAGAT
CAGCTTTAATAAGTACTTCTATCACCCTAAGCCGTTGCGTTCTCTGGAAGAGGTGGCGCAGGACATTATCAAGCTGGAGC
AGCAGTCTGAAGGCCTGATTGCGCAGATTTTGGGCGTTTCAGTTGACAAGATTCAGGGATAA

Protein sequence :
MDHSVHNKLISFIWNIADDCLRDVYVRGKYRDVILPMVVLRRLDTLLEPGKEAVLAEVKFQKEELRATELDDAPLMAASG
YVFYNTSKWTLNLLFKAATNNQQILLANFEEYLLGFSDNVKEIVACFNLQAQIRHMASKQVLLDVVEKFVSPYINLTHKA
VEDPEGYTMPALSNLGMGYVFEELIRKFNEENNEEAGEHFTPREVIDLMTHLVFDPVKDKLPLTMTVYDPACGSGGMLTE
SQNFIEAKYPSSNRDIYLYGKEINDETYAICKSDMMIKGNNPENIRVGSTLSTDEFAAERFDFMLSNPPYGKSWASEQKY
IKDGGDVIDPRFKVRLQDYSGKEETVDATPRSSDGQLLFLMEMVSKMKDPAIGSLGSRIASVHNGSSLFTGDAGGGESNI
RRYLIENDMLDAIVQLPNNLFYNTGITTYIWLLNNNKPQDRQGKVQLIDASLLYRKLRKNLGNKNCEFAPEHIAEIAQTY
LACAGVERKLDANHDAVGIASKVFSNDDFGYYKVTVERPDRRKARFTREAIQPLRFDKQLAEVMAWLYGEHGDKIYEKGF
LASVEKATLAWCAERDISLNTKAKSKLLDVKNWLSLQRVYHTAERLMATLGGGEFDDFNLFKAQVEQVLKAEKIKLSAAE
KNAIVNAVSWYDETAARVINKTVKLNGDKLQDLLARLECEAEDLPDFGFYPSGKKDEYIIYDSSADLRDTESVPLKQSIY
QYFLDEVKPHVAEAWINLDSVKIGYEISFNKYFYHPKPLRSLEEVAQDIIKLEQQSEGLIAQILGVSVDKIQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1769 NP_231404.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 76
VC0395_A1367 YP_001217310.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 76
VPI2_0017c ACA01834.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 76

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EpC_35330 YP_002650514.1 DNA methylase VFG1102 Protein 0.0 76