Gene Information

Name : EpC_35290 (EpC_35290)
Accession : YP_002650510.1
Strain : Erwinia pyrifoliae Ep1/96
Genome accession: NC_012214
Putative virulence/resistance : Virulence
Product : type I restriction-modification system restriction subunit
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0610
EC number : -
Position : 3843481 - 3846531 bp
Length : 3051 bp
Strand : -
Note : silverDB:cEP03530

DNA sequence :
ATGGTCAGTCAAACTAACGAGCAGGCGCTGGAATCAGCCATTGAAAAGAGTTTGGTCGGCATCAGTGCTGAAGAGCGGAA
GGCGGGAGTGGTAGCGCAGCACGCAGCAGCAGGGTATCTCGCCGGGGCGGCAGCTGATTTCAATAGGCAGTATGCCCTTG
ACGAGCGCTTCTTCTGGCAGTACCTGCAGCAGACTCATGCGCCGGAACTGGCCAAACTGCAAAAACACCATCCGGCTGAC
TGGCAACGCAAGCTGCTTGAGCGTTATGACCGACTGATTAAAAAGCACGGCGTATTGCACCTGCTGAAGAAAGGGCTAAG
CGTCGATGACGCGCATTTTAACCTGATGTTTCCCGCTCCGCTGGCCAGCAGCGGTGAAAAGATAAAACAAAACTTTGCAG
AAAACAGGTTTAGCTGCACCAGACAGGTGCGCTATTCCCTGGGCAATCCGCTGCAGGAAATTGATATGGTGCTGTTTATC
AACGGCATCCCCTTTGCCACGCTGGAACTCAAAAATGCCTGGACCGGGCAGACTGCGCGTTATCACGGCCAAAAGCAGTA
CTGTGAAGACCGGGACAGCAGCCAGGCATTACTGACATTTGGCCGCTGCCTGGTGCATATGGCGGTGGATACCGATGAAG
TCTATATGACGACAAAGCTGGCGGGTAAAAGCACCTTCTTCCTGCCGTTCAATAAAGGCCACCATCACGGGCAAGGCAAC
CCACCCAACCCCAACGGGCACCGAACGGCGTATCTGTGGCAGGAGATTTTTACCCGCGATAGCGTGGCAAATATCATCCA
GCATTTTGTTCGTCTGGATGGCAGCAGCAAAGATTCTTTAGCAAAACGCACGCTGTTTTTCCCGCGTTATCATCAGCTTG
ATGTGGTTCGTCAGCTTGTCGCCCATGCGGCGACTTATGGGGTTGGTCAAACCTATTTGATCCAACACTCGGCCGGTTCA
GGCAAGTCCAATTCGATCACCTGGGCGGCCTACCAGTTAATTGAAACCTGTCCGCTCTCTGCAGCCGCTGCTGCGGGCAA
AAGTTTAGAACAGCCGCTATTCGATTCCGTTATCGTGGTGACCGACAGACGTTTGCTGGATAAACAGCTGCGCGACAACA
TCAAAGAATTTTCTGAGGTCAAAAATATCATCGCCCCGGCGTATAAATCCTCGGAGCTGAAGCAGGCGCTGGAAAGTGGA
AAAAAGATCATTATCACCACCATCCAGAAATTTCCCTTTATCATTGACGGCATAGCCGATCTCAGCGACAAGCGTTTTGC
GGTGATCATTGACGAAGCGCACAGCTCCCAATCCGGCTCTGCCCATGACAATATGAACCGTGCTATGGGTAAAGCGCAGG
TGGAAGAGGCCGAGGACGCCCAGGATAAAATCCTGCAGGCCATGAACTCGCGTAAAATGCGCGGTAATGCCACCTACCTG
GCCTTTACCGCCACGCCGAAAAACAGCACCCTGGAAAAATTTGGCCAATGCCAGCAGGACGGAACCTTTAAACCTTTTCA
TCTCTATTCGATGAAGCAGGCCATTGAAGAGGGCTTTATTCTCGACGTGCTCGCCAACTACACCACGTTTCGCAGTTATT
ACGAGATCGAAAAGTCCATCGCCGATAATCCCGAGTTTGATAGCCAGAAAGCGCAAAAGAAACTGCGCGCTTACGTTGAG
CGCAGTCAGCAGACCATTGATACCAAAGCCGGGATCATGCTTGAACACTTTGTGCCGCATATTGTGAATGCGAAGAAGCT
GAAGGGGAAAGCGAAAGGCATGGTGGTTACGCAGAATATCGAGGTGGCCATTCGCTACTACAAGGCGATTCAGCGTATTC
TGCAACAGCAGGGCAACCCATTTAAGGTGCTCATTGCCTTCTCCGGCAGTAAAGAGGTCGATGGTATTGAATATACCGAA
GCGGATATTAATGGCTTCGCGGAAAATGATACCAAAGAGGCATTTGACAGCGATGAATATCGCCTGCTGGTGGTGGCCAA
TAAATACCTGACCGGCTTTGACCAGCCTAAATTATGTGCCATGTACGTCGACAAGAAGTTAACCGGCGTGCTGTGCGTAC
AGGCGCTCTCGCGTTTAAACCGCAGTGCGCCCAGGCTGGGTAAAAAAACCGAAGACCTGTTTGTGCTGGATTTCTTTAAC
TCTGTCGAAGATGTGCAGGCGGCATTTAACCCCTTCTATACCGCCACGTCGCTGTCCCGGGCAACCGATGTCAACGTGCT
TCATGAACTGAAGGATGAGATGGATGATGCGGGCGTATATGAGTGGTACGAAGTCGAAGATTTTGTTGCGCGCTATTTCA
ATAATGAAGATGCACAAACGTTAAGCCCTGTTATAGATCGGGCGGCGGCACGCTTTGCCAGCGAGCTGGAACTGGAGCCA
GAGCAAAAAATAGATTTTAAAGTTAAGGCCAAGCAGTTTGTGAAGATTTACGGCCAGATGGCATCGATCATGCCTTATGA
AATGGTGGCATGGGAAAAACTGTTCTGGTTCCTGAAGTTCCTGATACCTAAACTGATCGTAGAAGACCCGGACGCAGATG
CGTTCGACAAATTACTGGAGTCAGTAAATTTAAGCTCCTACGGCTTACAGCGGGTTAAGCTGGGTCATGGCATCAAGCTG
GATGCAGCTGAAACGGAAGTCGATCCTCAGAACCCGAATCCCAGAGGTGCGTACGGTACAGAAAGAGAGACCGATCCGCT
GGATGAGATCATTCGCAACTTCAATGAGCGCTGGTTCCATGGGTGGCGCGCCACGCCCGAGGAGCAGAAAATTAAGTTTG
TGAATATGGTCAATAGCGTGCGCAACCACCCGGACTTTGCCGCCAAGTATCAAAACAACCCGGATCCGCACAACCGGCAG
TTGGCCTTTGACAAGATGCTGAAGGAAGTTATGCTGCTACGCCGGAAAGAAGAGCTGGAACTCTATAAGCTTTACGCCAA
TGACCCGGCATTTAAAGCATCATTGACCCAAAGCATGCAGCATATGCTCGACCAGGGCGGCGGAATGGGTGCGCAACCCC
CGGCACAATAA

Protein sequence :
MVSQTNEQALESAIEKSLVGISAEERKAGVVAQHAAAGYLAGAAADFNRQYALDERFFWQYLQQTHAPELAKLQKHHPAD
WQRKLLERYDRLIKKHGVLHLLKKGLSVDDAHFNLMFPAPLASSGEKIKQNFAENRFSCTRQVRYSLGNPLQEIDMVLFI
NGIPFATLELKNAWTGQTARYHGQKQYCEDRDSSQALLTFGRCLVHMAVDTDEVYMTTKLAGKSTFFLPFNKGHHHGQGN
PPNPNGHRTAYLWQEIFTRDSVANIIQHFVRLDGSSKDSLAKRTLFFPRYHQLDVVRQLVAHAATYGVGQTYLIQHSAGS
GKSNSITWAAYQLIETCPLSAAAAAGKSLEQPLFDSVIVVTDRRLLDKQLRDNIKEFSEVKNIIAPAYKSSELKQALESG
KKIIITTIQKFPFIIDGIADLSDKRFAVIIDEAHSSQSGSAHDNMNRAMGKAQVEEAEDAQDKILQAMNSRKMRGNATYL
AFTATPKNSTLEKFGQCQQDGTFKPFHLYSMKQAIEEGFILDVLANYTTFRSYYEIEKSIADNPEFDSQKAQKKLRAYVE
RSQQTIDTKAGIMLEHFVPHIVNAKKLKGKAKGMVVTQNIEVAIRYYKAIQRILQQQGNPFKVLIAFSGSKEVDGIEYTE
ADINGFAENDTKEAFDSDEYRLLVVANKYLTGFDQPKLCAMYVDKKLTGVLCVQALSRLNRSAPRLGKKTEDLFVLDFFN
SVEDVQAAFNPFYTATSLSRATDVNVLHELKDEMDDAGVYEWYEVEDFVARYFNNEDAQTLSPVIDRAAARFASELELEP
EQKIDFKVKAKQFVKIYGQMASIMPYEMVAWEKLFWFLKFLIPKLIVEDPDADAFDKLLESVNLSSYGLQRVKLGHGIKL
DAAETEVDPQNPNPRGAYGTERETDPLDEIIRNFNERWFHGWRATPEEQKIKFVNMVNSVRNHPDFAAKYQNNPDPHNRQ
LAFDKMLKEVMLLRRKEELELYKLYANDPAFKASLTQSMQHMLDQGGGMGAQPPAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0013c ACA01830.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 0.0 74
VC1765 NP_231400.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 0.0 74
VC0395_A1363 YP_001217306.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 0.0 74

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EpC_35290 YP_002650510.1 type I restriction-modification system restriction subunit VFG1098 Protein 0.0 74