Gene Information

Name : pilS (EpC_32250)
Accession : YP_002650206.1
Strain : Erwinia pyrifoliae Ep1/96
Genome accession: NC_012214
Putative virulence/resistance : Virulence
Product : type IV prepilin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3510533 - 3511126 bp
Length : 594 bp
Strand : -
Note : silverDB:cEP03226

DNA sequence :
ATGAAAATTAAAAATAAAAACGTAAAGAACAATATTGATAGCGGTGCGATCTCACTTTTTGAGGCAGGGATCTGGATAAC
CATCTCCTTAATAGTGTTGGTTATTGGTATCAGTATAGGGGGTGGGTTGTTCAGTCGTAATGATACCAATACTGAACTCA
GTAATATTAGTGAGCTGATGAATAACAGCCGTACCTTGTTGAAAACTAACGGAACTTACAATTTTGAGGGCGGCGAATCC
ATGATTGGGGCGTTGATTCAGTTCGGTGGTGTTCCTGGTAATATGTCAATAATTGGGGATAAAAGTTCAGGTAAAGCACA
TCTGCAAAACGTATGGGGAGGTGCGGTCTCCGTCGAGCCAGCTGCAGACAGTGCCGGGGAATTAACAGGCTTTCACCTTA
TCTATCAAATGGTGCCACAAGAGGCCTGTATCGCTATTGCTCAGCGTCTCAGCACGACCAGTTTTGTTCACGCTATCCGC
ATCAATGACACCATCAACCGGGGTTCAATATCGGCAGGGAATCTGGGGGGGCAATGTGTAGCCGACAGTGGCGAACATAA
AGGGAATATATTGAGCTTCATCAGTGATAACTAA

Protein sequence :
MKIKNKNVKNNIDSGAISLFEAGIWITISLIVLVIGISIGGGLFSRNDTNTELSNISELMNNSRTLLKTNGTYNFEGGES
MIGALIQFGGVPGNMSIIGDKSSGKAHLQNVWGGAVSVEPAADSAGELTGFHLIYQMVPQEACIAIAQRLSTTSFVHAIR
INDTINRGSISAGNLGGQCVADSGEHKGNILSFISDN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3500 YP_001007661.1 putative type IV prepilin Virulence YAPI Protein 3e-21 41
pilS YP_001402683.1 type IV pilus biogenesis protein Virulence YAPI Protein 4e-23 41
pilS CAF28492.1 putative major pilin subunit Virulence YAPI Protein 1e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pilS YP_002650206.1 type IV prepilin VFG2315 Protein 1e-21 41