Gene Information

Name : tnpA (EpC_32080)
Accession : YP_002650189.1
Strain : Erwinia pyrifoliae Ep1/96
Genome accession: NC_012214
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3328
EC number : -
Position : 3499393 - 3500601 bp
Length : 1209 bp
Strand : -
Note : silverDB:cEP03209

DNA sequence :
ATGGACGAAAAGAAACTCAAGGCCCTTGCGGCTGAACTGGCTAAAGGCCTTAAAACCGAAGCCGATCTCAATGCGTTTTC
CCGCATGCTGACGAAGCTTACCGTTGAAACAGCACTCAATGCTGAGCTGACTGACCACCTCGGGCACGAGAAAAACGCCC
CAAAAGCAGGCTCCAATACCCGCAACGGCTATTCGTCAAAAACTCTGCTGTGCGATGACGGCGAGATTGAACTCAGCACA
CCGCGTGACCGTGAAAACACCTTTGAACCTCTGCTGATAAAGAAAAACCAGACGCGTATCACGCAGATGGACAGCCAGAT
TTTGTCCCTGTACGCCAAAGGCATGACGACCCGAGACATCGTCGCCACGTTCAGGGAAATGTACGATGCGGACGTGTCGC
CCACGCTGATTTCAAAAGTCACGGATGCCGTTAAAGAGCAGGTTGCTGAATGGCAGAACCGCCCGTTGGATGCACTTTAT
CCCATTGTTTATCTTGACTGTATCGTGGTGAAAGTTCGTCACGATGGCAGCGTGATTAACAAGGCCGTCTTCCTCGCTCT
GGGCATTAATACCGAAGGCCAGAAAGAGCTGTTGGGCATGTGGCTGGCAGAAAACGAAGGCGCGAAGTTCTGGCTCAGCG
TGCTGACAGAGCTTAAAAATCGGGGCCTTCAGGACATCCTGATTGCCTGTGTGGACGGACTGAAGGGCTTCCCGGATGCG
ATAAACAGCGTTTATCCTCAGACGCATATCCAGCTGTGTATTATTCATATGGTGCGCAACAGCCTGAAATACGTGTCGTG
GAAGGACTACAAGGCCGTCACCGGCGGGCTGAAAAAGGTGTATCAGGCTCCGACAGAAGAGGCGGCGCTGATGGCGCTGG
ATAAGTTTGCAGGCATCTGGGACGAGAAATACCCGCAAATCAGTAAGAGCTGGCGCACACACTGGGAAAATCTTAATACG
TTCTTCGGCTATCCGCCCGATATCCGTAAGGCTATCTACACCACGAACGCCATCGAATCACTGAACAGCGTGATCCGCGC
AGCCATCAAAAAGCGAAAGGTGTTCCCGACAGATGACTCGGTGAGAAAGGTCATTTATCTGGCGATCAAGGATGCGTCAA
AAAAATGGAATATGCCGATCCAGAACTGGCGGCTGGCAATGAGCCGTTTTATTATCGAGTTCGGTGATCGCCTGAGCGAT
CACCTTTAA

Protein sequence :
MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTDHLGHEKNAPKAGSNTRNGYSSKTLLCDDGEIELST
PRDRENTFEPLLIKKNQTRITQMDSQILSLYAKGMTTRDIVATFREMYDADVSPTLISKVTDAVKEQVAEWQNRPLDALY
PIVYLDCIVVKVRHDGSVINKAVFLALGINTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDA
INSVYPQTHIQLCIIHMVRNSLKYVSWKDYKAVTGGLKKVYQAPTEEAALMALDKFAGIWDEKYPQISKSWRTHWENLNT
FFGYPPDIRKAIYTTNAIESLNSVIRAAIKKRKVFPTDDSVRKVIYLAIKDASKKWNMPIQNWRLAMSRFIIEFGDRLSD
HL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 1e-173 95
CPR_0630 YP_697957.1 ISCpe3, transposase Not tested Not named Protein 7e-87 48