Gene Information

Name : hrpL (EpC_30850)
Accession : YP_002650066.1
Strain : Erwinia pyrifoliae Ep1/96
Genome accession: NC_012214
Putative virulence/resistance : Virulence
Product : hrp/hrc type III secretion system-Hrp/hrc secretion/translocation pathway-sigma factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 3380113 - 3380661 bp
Length : 549 bp
Strand : -
Note : silverDB:cEP03086

DNA sequence : 
ATGACAGAAATTCACCTGCAGTCAACAGAACCCACATCGGTCAACGAAGGGCTACCGCTGAATATTGATTGGGAAGGTAT
CTTTCGTGAGCATGGGCGACGCGTGCATCATTTTATTCGCAAGCGCGTTTCCCATCGCGAAGATGCCGAGGATCTGGAGC
AAATGACCTGGCTGGAAGTTTTGCGTAACCGTGACAAATTCGCCGGTGCGTCACGGCCAGAAACCTGGGTGTTTGGTATT
GCCTTAAATTTAGTACGCAACCATTTTCGCCTGCAGTCCGGACGGCCGCGTTGTGATGAGCTGGACGACGATATCATTCT
GACTCAGGGCGACGATCCAAGCCATATCACCGAATATCAGCGCCTGCTGAACTCGACGCTTAATTCCATTGCCGTATTGC
CGGAAGATGCCCGCCGTCTGATGAACATGCTGGTCGAGAAAGACGGCAGCTATCAGGATATCGCAGCACATTTAAATATC
CCGATTGGCACCGTGCGTTCACGTCTGTCGCGCGCGCGCGTCACGCTGAAGCAGTCAGTATTTTCTTAA

Protein sequence : 
MTEIHLQSTEPTSVNEGLPLNIDWEGIFREHGRRVHHFIRKRVSHREDAEDLEQMTWLEVLRNRDKFAGASRPETWVFGI
ALNLVRNHFRLQSGRPRCDELDDDIILTQGDDPSHITEYQRLLNSTLNSIAVLPEDARRLMNMLVEKDGSYQDIAAHLNI
PIGTVRSRLSRARVTLKQSVFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpL AAD24681.1 sigma factor HrpL Virulence Hrp PAI Protein 1e-80 96
hrpL ABA47271.1 HrpL Virulence S-PAI Protein 2e-35 51
hrpL AAT96335.1 HrpL Virulence S-PAI Protein 2e-31 49
hrpL AAT96295.1 HrpL Virulence S-PAI Protein 1e-31 49
hrpL AAT96254.1 HrpL Virulence S-PAI Protein 1e-31 49
hrpL AAG33875.2 HrpL Virulence Hrp PAI Protein 7e-24 44
hrpL NP_791231.1 RNA polymerase sigma factor HrpL Virulence Hrp PAI Protein 1e-24 44
hrpL AAT96137.1 HrpL Virulence T-PAI Protein 1e-24 43
hrpL AAT96191.1 HrpL Virulence T-PAI Protein 1e-24 43
hrpL ABQ88350.1 HrpL Virulence Hrp PAI Protein 8e-24 43
hrpL AAA17652.1 putative alternate sigma factor Virulence Hrp PAI Protein 8e-24 43