Gene Information

Name : hrcJ (EpC_30790)
Accession : YP_002650060.1
Strain : Erwinia pyrifoliae Ep1/96
Genome accession: NC_012214
Putative virulence/resistance : Virulence
Product : Hrp/hrc secretion/translocation pathway protein HrcJ
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4669
EC number : -
Position : 3374958 - 3375737 bp
Length : 780 bp
Strand : -
Note : silverDB:cEP03080

DNA sequence :
ATGGCTAAATTATCTTTCAAGATACTGCTTTTGCTGCCGGTACTGCTGCTGGTCGGCTGCAATGACCAGGTCGAACTCAA
TCATGGTCTGACAGAAAACGACGCCAACGAAGTGGCGGCGGAGCTGGGTCGTTATCATATCCAGGCGGAAAAACTGGCCA
ATAAAGACGGTATTACCGTGATGGTAGATGCCGCAGAGTTAAATCGGGCGGTACATATTCTTGATGCGGCGGGTTTGCCG
CGACCGGCGCGCACCAACCTTGGCGAGGTGTTCCAAAAGAACGGCGTGATCTCCACGCCGCTGGAAGAACGGGCGCGCTA
CATTTATGCCTTATCCCAGGAAGTTGAATCGACCCTGAGTCAGATTGACGGGGTGATCGTCGCCCGGGTACATGTGGTGC
TACCGGAGCGCATTGCGCCGGGTGAACCGGTGCAGCCCGCCAGCGCAGCGGTGTTTATCAAATATCGCCCCGATCTCGAC
CCCGACATTATCGAACCGCGCATCCGGCGCATGGTTGCCAGCAGCCTGCCGGGCCTGGCCGGTCGGTCAGACAAAGATCT
GGCGATTGTCTTCGTTCCCGCCGAGAGTTATCAGGATAAACCGCCGAAGGTGTCCTTTGGTCCGTTTTTGGTCACGCCAG
AGCAATCGGCACAGTTAAGCTGGCTGAGCGGCATGATTGGCGTGCTGATCCTGATGGTGGTAGCGGGCGTGCTGGGTTGG
CCGCACTGGCAACGCTATCGTCAACGGCAGCAACCGCCGCCGGGGCAGAAAGATGAGTGA

Protein sequence :
MAKLSFKILLLLPVLLLVGCNDQVELNHGLTENDANEVAAELGRYHIQAEKLANKDGITVMVDAAELNRAVHILDAAGLP
RPARTNLGEVFQKNGVISTPLEERARYIYALSQEVESTLSQIDGVIVARVHVVLPERIAPGEPVQPASAAVFIKYRPDLD
PDIIEPRIRRMVASSLPGLAGRSDKDLAIVFVPAESYQDKPPKVSFGPFLVTPEQSAQLSWLSGMIGVLILMVVAGVLGW
PHWQRYRQRQQPPPGQKDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcJ AAB49174.1 HrcJ Virulence Hrp PAI Protein 5e-102 98
hrcJ AAT96359.1 HrcJ Virulence S-PAI Protein 1e-58 64
hrcJ AAT96279.1 HrcJ Virulence S-PAI Protein 3e-58 64
hrcJ AAT96320.1 HrcJ Virulence S-PAI Protein 3e-58 64
hrcJ AAB05080.1 HrcJ Virulence Hrp PAI Protein 2e-56 64
hrcJ AAT96157.1 HrcJ Virulence T-PAI Protein 1e-54 64
hrcJ AAT96211.1 HrcJ Virulence T-PAI Protein 1e-54 64
hrcJ AAC35801.1 putative hrp type III secretion pathway protein Virulence Hrp PAI Protein 3e-56 62
hrcJ ABA47308.1 HrcJ Virulence S-PAI Protein 9e-61 61
hrpC AAB00129.1 HrpC Virulence Hrp PAI Protein 1e-56 57
hrcJ NP_791211.1 type III secretion protein HrcJ Virulence Hrp PAI Protein 2e-56 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hrcJ YP_002650060.1 Hrp/hrc secretion/translocation pathway protein HrcJ VFG0218 Protein 7e-27 42