Gene Information

Name : EpC_30310 (EpC_30310)
Accession : YP_002650012.1
Strain : Erwinia pyrifoliae Ep1/96
Genome accession: NC_012214
Putative virulence/resistance : Unknown
Product : plasmid-like protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3451
EC number : -
Position : 3330839 - 3333640 bp
Length : 2802 bp
Strand : -
Note : silverDB:cEP03032

DNA sequence :
ATGACATTCCCTCTTTTCCGCCGCAGGCCGAAGCGGCAGGACGCACACCAGTACGGTGACGGGCCGTTTGCCGTAAACGG
TCATCAACCCCTGACCCGCGACGGACGCCTGACGCGCACCGACGAAGCGCGTCTGTACGCTACCGCACCGTCGGTTATCG
ATCATGTGCCGTGGGGCGAGTACCTCCCGGAACACCAGTGCCTGCTGCTTGATGACGGCGTGTCGGTTGGCGCGGTGTAT
GAAATTATCCCGACGGGCACCGAGGGGCGTCCTGCATCGCGACTGGACGAGATCCGCGACGTGGTGGAAAACGCGCTGCA
GGACAGCCTGCCGGAGCTAGACTCCCATCAGTGGGTGGTGCAGTTTTACTGTCAGGACGAATCTGACCTCTCCTCTTATA
TGGATAAGGTCAGGGGCTACGTCAGGCCGTGGGCGCAGGGAACCGCTTTTACCGAAGCCTGGCTCAGCGAACAGGCGCGT
CACCTGCAAAACGTTGCCGTTGAACAGGGGCTGTTTATGGATGACGCGGTGACCGGAGCCCCCTGGCGCGGGCAGATGCG
CCGCACCCGCATGGTGGTCTATCGCTGGGTGGAAACGCCGTACCGTGACCCGATGGCTCCGGAAGTGCTGTTGAATCAGG
TATGCGACCGGCTGACCGCCGCCATAAGCGGTGCCGGCATCCAGAGCCAGCGCCAGAACGGCGAGCAGATCCACAGCTGG
CTGCTGCGCTGGTTCAATCCCGAACCGCAGTGGGTGGACAAGGCGACGCTGTATCGCTGCGCCCGCTACCGCGATGATGC
GCCGGGCGATCTGCCGCTGCTCAATGATTTCAGCGAAAGCCTGTGGTTCACCCGTCCGCGCAGCAATGCGGAGAAGGGCG
TCTGGTGGTTTGATGACGTGGCGCATAAGGCGGTGCCGGTTGCCCGTCTGCGTACTGCACCCTCGACCGGGCATTTAACC
GGCGAGGTCAGGCGCGGCGACAACATCAACGCCATCATGGATCTGCTGCCGCAGGGCACCGTTCTGACGCTGACGCTGGT
TATCCAGCCGCAGGACAAACTGGAGGAGAATTTTGCCCGTCTGAGCCGCGACTCGATGGGGGAGAACGTCGACTCGCTGC
GCGCCCGCGAGGATGCCGCCCGCGCACGAACCTTCCTCGGGAACAAGCATAAGCTCTATCGTGCGGCCATCTCGCTGCTC
ATCAAGGCGCGGGATCTGGAAACCCTCGACAAACGCTATCTCGACCTGAGCAGCAAGCTGCTGAACTGCGGCCTGGAGCC
GGTCAATCCGGAGCATGATATCGGCCCACTCAGCGGCTACCTGCGCGCGCTGCCCATGTGCTTTAACCCACAGCAGGATC
GCCATCACTGGTATACGCGCCTGATGTTCGTTCAGCACTTTGCCTGCCTGGCACCGGTGTATGGCCGTGATACCGGCACC
GGCAACCCGGGCTTTACCTTTTTCAACCGTGGCGGCGGTCCGCTTTCCGTCGACCCGCTGAATAAAAATGACCGTACCCA
GAATGCACATAAGCTGCTGTTCGGCCCGACCGGTGCCGGTAAGTCGGCTACCGCACTCTGCGAACTGGCGCAGATGATGG
CCATCTACCGGCCGCGCATCTTCCTGCTGGAGGCGGGCAACAGCTTCGGCCTGTTCGGGGATTACTGCGCTTCGCTGGGG
CTGACGGTGCACCGTGTCAGCATCAAGCCCGGCAAGGTCATCTCACTGGCTCCGTTCGGTGATTCGCACCTGCTGATGCA
GGCCAGGCCGGATGCCCTGCTGGTCAGCGAGGAGGCGTTGCCGGATATCGATGAAGACGATGAGGACAAGGATGAAGAGC
GTGACGTGCTGGGTGAGATGGAGATTGCGGCACGCCTGATGATCACCGGCGGTGAGGCGGCGGAGGAAGCGCGGATGACG
CGCGCCGATCGCGGCATGATCCGCGAGGCGATACTGATTGCGGCGAGAACCGCTTTTGGCGCAGACCGGCAGATGCTGCC
GGAAGACCTGATGTATGCGCTACAGAATATCGCGCGTGATGTCAGCACCGGCGACGACGGCCGCGAGAAGCGCACGCCCG
CACGCCGCGCCCGTGCCGAAGAGATGTCGGAAGCGCTGCGCATGTTTACCGAAGGCTTTGAAGGTGAGCTGTTTAACCGT
CCCGGCACGCCGTGGCCGGAGGCCGACGTCACCATCGTCGACCTGGGGACGCTGGCGCGTGAAGGGTATGAGGCCCAGAT
GGCGGTGGCCGTCATCTCTCTGCTCAACACCATTAACAATATCGCCGAGCGCGAGCAGTACAGCGACAGAGAAACCCTTG
TCCCGATCGATGAAGCGCATATCGTCACCGCCAACCCGCTGCTGGGGCCTTACGCCACCAAGATCGTCAAGATGTGGCGT
AAGCTCGGTGCCTGGCTGTGGCTGTTTACCCAGAACCTGGCGGACTTTCCCGATACGGCGAAAAAGATGCTCAATATGGC
GGAGTGGTGGATTTGTCTCGTTATGCCGCCTGACGAGGTGGAGCAGATAGCGCGCTTTAAGACGCTGACGGACGAGCAAA
AGACCATGCTGCTGTCTGCCACCAAACTGCCGAGAAAATACACCGAGGGCGTGATCCTGTCGCGCAAGGTGCAGGCGCTG
TTTCGTGCCGTACCACCGAGCCTCTATCTGGCGCTGGGGGTGACGGAGAAAGAGGAGAAAGCCGAAAGGCGGTCGATTAT
GAATGAACACCATTGCTCCGAGCTGGAGGCCGCTTTTCACGTTGCGCGGCGTCTTGATGAGAGTCGCGGTATGGTTATCT
GA

Protein sequence :
MTFPLFRRRPKRQDAHQYGDGPFAVNGHQPLTRDGRLTRTDEARLYATAPSVIDHVPWGEYLPEHQCLLLDDGVSVGAVY
EIIPTGTEGRPASRLDEIRDVVENALQDSLPELDSHQWVVQFYCQDESDLSSYMDKVRGYVRPWAQGTAFTEAWLSEQAR
HLQNVAVEQGLFMDDAVTGAPWRGQMRRTRMVVYRWVETPYRDPMAPEVLLNQVCDRLTAAISGAGIQSQRQNGEQIHSW
LLRWFNPEPQWVDKATLYRCARYRDDAPGDLPLLNDFSESLWFTRPRSNAEKGVWWFDDVAHKAVPVARLRTAPSTGHLT
GEVRRGDNINAIMDLLPQGTVLTLTLVIQPQDKLEENFARLSRDSMGENVDSLRAREDAARARTFLGNKHKLYRAAISLL
IKARDLETLDKRYLDLSSKLLNCGLEPVNPEHDIGPLSGYLRALPMCFNPQQDRHHWYTRLMFVQHFACLAPVYGRDTGT
GNPGFTFFNRGGGPLSVDPLNKNDRTQNAHKLLFGPTGAGKSATALCELAQMMAIYRPRIFLLEAGNSFGLFGDYCASLG
LTVHRVSIKPGKVISLAPFGDSHLLMQARPDALLVSEEALPDIDEDDEDKDEERDVLGEMEIAARLMITGGEAAEEARMT
RADRGMIREAILIAARTAFGADRQMLPEDLMYALQNIARDVSTGDDGREKRTPARRARAEEMSEALRMFTEGFEGELFNR
PGTPWPEADVTIVDLGTLAREGYEAQMAVAVISLLNTINNIAEREQYSDRETLVPIDEAHIVTANPLLGPYATKIVKMWR
KLGAWLWLFTQNLADFPDTAKKMLNMAEWWICLVMPPDEVEQIARFKTLTDEQKTMLLSATKLPRKYTEGVILSRKVQAL
FRAVPPSLYLALGVTEKEEKAERRSIMNEHHCSELEAAFHVARRLDESRGMVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3482 YP_001007641.1 hypothetical protein Not tested YAPI Protein 0.0 73
api39 CAF28513.1 hypothetical protein Not tested YAPI Protein 0.0 73
YpsIP31758_3705 YP_001402659.1 hypothetical protein Not tested YAPI Protein 0.0 73
STY4573 NP_458658.1 hypothetical protein Not tested SPI-7 Protein 0.0 64
PMI2576 YP_002152295.1 hypothetical protein Not tested Not named Protein 0.0 61
ORF SG57 AAN62279.1 hypothetical protein Not tested PAGI-3(SG) Protein 0.0 53
ORF C47 AAN62141.1 hypothetical protein Not tested PAGI-2(C) Protein 0.0 52
virB4 CAI36125.1 VirB4 component Not tested PPHGI-1 Protein 0.0 51
Pmu_03070 YP_005176206.1 conjugative transfer ATPase TraC-like, PFL family Not tested ICEPmu1 Protein 0.0 50
RL022 AAP84149.1 conserved hypothetical protein Not tested PAPI-1 Protein 0.0 49
unnamed ABR13362.1 hypothetical protein Not tested PAGI-5 Protein 0.0 48
EXA33 ABD94642.1 conserved hypothetical protein Not tested ExoU island A Protein 0.0 48