Gene Information

Name : EpC_30230 (EpC_30230)
Accession : YP_002650004.1
Strain : Erwinia pyrifoliae Ep1/96
Genome accession: NC_012214
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3319610 - 3320581 bp
Length : 972 bp
Strand : -
Note : silverDB:cEP03024

DNA sequence :
ATGAACATCACTTTCTCCCGCCCGCGCCGGCTGGCGCTGGCCACGATCATGGCCTGTAGCGGCACCCTGGCCAGCGTCAA
TACGGCAGGCCTGCTCGCCAGCGCCGCCAGTCCGGACTGCATCAGCTGGCGCGTCAGCGGTATCTGTTACTGGCTGATGT
GTACGCCCTTAGGCTGCACGGTCAAAACCTCCGTCAAGGTGACGCACTTTATCCCGCAGGCCGTTGTCTCCGCCTGGCTC
AGTCCGGGCGACAATCCCTGGACGGAGATGTCTGCGCTCAGCGCCACGGCAGACGGCGCAGAAAGCGTCCTGTTGGGCGG
CGCGGCAGGCGTGGCAACCGGTGGTGGTCGTCAGGAGATGAAAGTCCCCGGCATGCGCAGTCAGAACCTGCATTTCTATT
ACGCCGGTGCGTATGGCCATCCTGCGACAAAGATTATCGGCGGTATGGTTCCCGGCTATTCCTGTGACAGTGCCGCCACG
CCGTTTATTCCCTATTTCGTCAGCGCGCTCGATGCGCTGGCCTGGCGCACCGGCGTGCCGGAATCGGTGTATCCGGAGGC
GTTGATACCCGGCCAGCGCGAAGTGGGCAGCACGCCGTCCGGCAATATGTGGGGCAACGTCTACCCGCGCAGCGGCTTTG
TCACGCAGACCGACGGCTACAAATCAGCTGCGGTGGTGGTGCAGCGCGTGGCCGACATCATCACCCGTCAGGGGCAGCTT
CACGTCTACAACCCGCTGGTCGGGCAGCGCTCAGCGGGCTACTGGCCACCGGGAGCGGTCAGCGAAAACAGCGGCTCGAA
AAACCATAAGTGGCAGCGCCTTTCACCCCGGCTCTCGCAGAGCTGTGCGGTGTTTCCCGACGTCGGCGGTCAGATTGCGC
AGAACGGCAATTACGCCTGGGCGCTCTGGCAGCCCTACAGCTGCTGCAAACGTCGCGGTCAGACCTTCCTCTACAGCACG
GATTTCTCATAA

Protein sequence :
MNITFSRPRRLALATIMACSGTLASVNTAGLLASAASPDCISWRVSGICYWLMCTPLGCTVKTSVKVTHFIPQAVVSAWL
SPGDNPWTEMSALSATADGAESVLLGGAAGVATGGGRQEMKVPGMRSQNLHFYYAGAYGHPATKIIGGMVPGYSCDSAAT
PFIPYFVSALDALAWRTGVPESVYPEALIPGQREVGSTPSGNMWGNVYPRSGFVTQTDGYKSAAVVVQRVADIITRQGQL
HVYNPLVGQRSAGYWPPGAVSENSGSKNHKWQRLSPRLSQSCAVFPDVGGQIAQNGNYAWALWQPYSCCKRRGQTFLYST
DFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAX39458.1 unknown Not tested Hrp PAI Protein 1e-112 96
api54 CAF28528.1 conserved hypothetical protein Not tested YAPI Protein 6e-102 72
YpsIP31758_3701 YP_001402655.1 hypothetical protein Not tested YAPI Protein 3e-101 72
YE3467 YP_001007628.1 hypothetical protein Not tested YAPI Protein 9e-95 70
STY4576 NP_458661.1 hypothetical protein Not tested SPI-7 Protein 2e-99 68
t4273 NP_807871.1 hypothetical protein Not tested SPI-7 Protein 2e-99 68
PMI2573 YP_002152292.1 hypothetical protein Not tested Not named Protein 2e-90 65
pph89 CAI36130.1 hypothetical protein Not tested PPHGI-1 Protein 2e-73 51
unnamed ABR13357.1 hypothetical protein Not tested PAGI-5 Protein 1e-68 51
EXA20 ABD94629.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-68 51
RL017 AAP84144.1 conserved hypothetical protein Not tested PAPI-1 Protein 5e-68 50
ORF SG51 AAN62273.1 hypothetical protein Not tested PAGI-3(SG) Protein 5e-70 48
Pmu_02990 YP_005176198.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 3e-62 48
ORF C43 AAN62136.1 hypothetical protein Not tested PAGI-2(C) Protein 9e-70 48