Gene Information

Name : EpC_30220 (EpC_30220)
Accession : YP_002650003.1
Strain : Erwinia pyrifoliae Ep1/96
Genome accession: NC_012214
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3318195 - 3319598 bp
Length : 1404 bp
Strand : -
Note : silverDB:cEP03023

DNA sequence :
ATGAACAGATATCTTCTGATGACCGGCATTTGGCTGGCAGCATCCTCGCTGCCGGCAGCGGCCGTTGACGCGTCACTCTC
TTCTTCAGGCGGATCGGTAAGCGGGGCGGTCAGTGATGGCCTGTTTTATTCCATCGGCGGTGGATCGGTGACCTCTCCGC
CGCCCAGCCGCAGCAATATGTCCCGTCTGGGGCTCAACGGCGGCTGGAGCAGCGACCTGATGTGCGGCAACTTCGACCTG
AAAACCACCGTGGGTAACCAGCTCAACGGTATTACCAGCGGCTTCAAGGATCTGATGGGCAACGTTATCCAGGGCGCGAC
GGGGGCGGTGATGAGCATGCCGGCGATGGCCATCCAGCGGGCGAATCCGGGGCTGTATGAAATGCTGACTAACGGCGTAT
TGCAGGCGGGTATTAACTTCGACAAGGGGCAGCTCAACTGCCAGAACATGTCGAAGAAGCTGGCCGACTATACAATGGGC
AGCAAATGGCAGCAGGCTGCGGTGTCGGAGGAGTATAAGGATATCGTCGCTGGCAGCGGCGGTGATGCCGTCTCCAGCGA
CCAGAAATTGCAGAAAGCTACCGGCGAGGAGGGCGTCACCTGGGTAGGGGGCGAGAAGCGCGGAGGCAAGGGGCAGCGCG
CCATCCAGCCAACCCGTGACCTCGCTAAAGCGGGCTACAACATGATGAACGGCCTGCCGGTCACCAGCAACAACAGCGTT
GCTGCTGCCAGCTGCAACGGCAGCGCCTGCCAGCGTTACAAAACCTCTGACGAGGCGTCGGCGGCGGTGGTGAAAGTGCT
GGGCGACCGCTCCATCCGTACCTGCCGGGAAACCAGCGAGTGTGCCAGCGGCGGGAGCGAAAACCAGCCGGGCAGCACCA
TTGCCGGTAGCGGTTTCTCACCGCTGCTGGAAGATGCCACCAAAGAGAACCTTGAGCAGCTGGGTAAGCTGGTTAACGGC
CAGCTGCCGCCGACCGCCGATAACCTGGCCGGGATCAGAACCGGCAGTCTGGTGGTCACGCGCGGGGTGATACAGGCACT
GCGCGACGATCAGGATAAGGCCGCGCTGGTTCAGCGTCTTGCCGGTGAACTTGCTATGGCCGACACCGTGGAGACCGCGC
TGACCATGCGCCGTATGCTCACCACCGGTCAATCAGAACCTAACGCCGCCGGGCAGACGGAAGCCATTGCCGAAGGTGAC
CGCCGCATTGATGCGCTCGATCGCGAAATCGCCGCCCTGCGTAACGAGATGGAGCTGCGTAAATCCATCAGCAGTAACAG
CCTGCTGACCACGCTGGAGCGTCAGGGGGCGCGCAATCAGGACAACCGCCTGCAGCAGACGTCCGGCAGTGAGGATCAGG
GGTTCGGCAGGATGGGGCAGACGCAGCCGACGGGAGCGAACTGA

Protein sequence :
MNRYLLMTGIWLAASSLPAAAVDASLSSSGGSVSGAVSDGLFYSIGGGSVTSPPPSRSNMSRLGLNGGWSSDLMCGNFDL
KTTVGNQLNGITSGFKDLMGNVIQGATGAVMSMPAMAIQRANPGLYEMLTNGVLQAGINFDKGQLNCQNMSKKLADYTMG
SKWQQAAVSEEYKDIVAGSGGDAVSSDQKLQKATGEEGVTWVGGEKRGGKGQRAIQPTRDLAKAGYNMMNGLPVTSNNSV
AAASCNGSACQRYKTSDEASAAVVKVLGDRSIRTCRETSECASGGSENQPGSTIAGSGFSPLLEDATKENLEQLGKLVNG
QLPPTADNLAGIRTGSLVVTRGVIQALRDDQDKAALVQRLAGELAMADTVETALTMRRMLTTGQSEPNAAGQTEAIAEGD
RRIDALDREIAALRNEMELRKSISSNSLLTTLERQGARNQDNRLQQTSGSEDQGFGRMGQTQPTGAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAX39459.1 unknown Not tested Hrp PAI Protein 0.0 99
api55 CAF28529.1 putative exported protein Not tested YAPI Protein 2e-148 77
YpsIP31758_3700 YP_001402654.1 hypothetical protein Not tested YAPI Protein 2e-147 77
YE3466 YP_001007627.1 hypothetical protein Not tested YAPI Protein 3e-148 77
STY4577 NP_458662.1 hypothetical protein Not tested SPI-7 Protein 2e-128 65
t4274 NP_807872.1 hypothetical protein Not tested SPI-7 Protein 2e-128 65
PMI2572 YP_002152291.1 hypothetical protein Not tested Not named Protein 1e-119 60
ORF C42 AAN62135.1 hypothetical protein Not tested PAGI-2(C) Protein 9e-65 43
unnamed ABR13356.1 hypothetical protein Not tested PAGI-5 Protein 5e-66 42
ORF SG50 AAN62272.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-67 42