Gene Information

Name : xerD (EpC_29300)
Accession : YP_002649911.1
Strain : Erwinia pyrifoliae Ep1/96
Genome accession: NC_012214
Putative virulence/resistance : Unknown
Product : tyrosine recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 3230293 - 3231222 bp
Length : 930 bp
Strand : -
Note : silverDB:cEP02931

DNA sequence :
ATGTTGTCGCGTTTAAGGTGCGGAAAGGGGAAAGTGGTGCAGGATAACGATCTGATTGAGCAATTTCTTGATGCCCTGTG
GATCGAGCGCAATCTGGCGCAAAATACCGTGGATTCTTATCGCCTCGATCTGCGCTCACTCGGTGACTGGCTGGCGCACC
AGCAGCTGTCGCTGTTGAACGTTGAGGTGTTCAATCTGCAGGAGTTCCTGGCGCAGCGCCTGGAGGGTGGCTATAAAGCC
ACCAGTTCTGCGCGCCTGCTTAGCGCGATGCGCCGTCTGTTTCAGTACCTCTATCGGGAAAAGCTGCGTGAAGACGACCC
CAGCGCGCTGCTTTCCTCACCCAAGCTGCCGCAGCGGCTGCCGAAGGATCTGTCGGAAGCCCAGGTAGAAAGATTATTAC
AGGCACCATGCCTGGAACAGCCGATTGAACTGCGCGATAAGGCGATGCTGGAACTGTTGTACGCCACCGGTCTGCGCGTG
ACGGAACTGGTCGGTCTGACCCTGAGTGATATCAGTCTGCGTCAGGGGGTGGTACGGGTGATCGGTAAAGGAAATAAAGA
ACGCCTGGTGCCGATGGGCGAAGAGGCGGTGCACTGGATCGAGCAGTATATTGAGTATGGCCGCCCGTGGCTGCTTAATG
GACAGACGATTGACGTGTTGTTCCCCAGTAACCGCGCGAAACAAATGACGCGTCAAACCTTCTGGCATCGCATCAAACAT
TACGCCACACTGGCGGGTATCGACAGCGACAAACTGTCACCCCACGTTCTGCGCCATGCTTTTGCAACCCATTTGTTGAA
CCACGGGGCAGATTTACGTGTCGTACAGATGTTATTAGGTCACAGCGATTTATCAACGACACAGATTTATACCCATGTAG
CGACAGAGCGTCTGCGACAGCTGCATCAGCAGCACCATCCACGCGCCTGA

Protein sequence :
MLSRLRCGKGKVVQDNDLIEQFLDALWIERNLAQNTVDSYRLDLRSLGDWLAHQQLSLLNVEVFNLQEFLAQRLEGGYKA
TSSARLLSAMRRLFQYLYREKLREDDPSALLSSPKLPQRLPKDLSEAQVERLLQAPCLEQPIELRDKAMLELLYATGLRV
TELVGLTLSDISLRQGVVRVIGKGNKERLVPMGEEAVHWIEQYIEYGRPWLLNGQTIDVLFPSNRAKQMTRQTFWHRIKH
YATLAGIDSDKLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 5e-58 56
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 5e-58 56