Gene Information

Name : pagC (EpC_29180)
Accession : YP_002649899.1
Strain : Erwinia pyrifoliae Ep1/96
Genome accession: NC_012214
Putative virulence/resistance : Virulence
Product : virulence membrane protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3637
EC number : -
Position : 3215063 - 3215620 bp
Length : 558 bp
Strand : +
Note : silverDB:cEP02919

DNA sequence : 
ATGAAAGTAAAAGTTATGGCAGTGATTTTGGCCTTAAGCGCTCTGCAAGCCAGCTTGCTGGTGCATGCAGACAGTCATGC
TCTATCGATCGGCTATGCGCAAAGCCGGGTGCAGGATTTTAAAAATCTGCGGGGTGTTAACCTCAAGTATCGCTATGAGC
CGAATTCTTTACTTGGCGTCATCACGTCATTCAGCTATATGTCTGCTGGAGGACACGAGTTTGATTCGCTCAGCTGGGGG
GACACATATTACGACGACCGTATAAAAGTAAAATACTATTCGTTACTTATCGGTCCGTCTTATCGAATTAACAAATATGT
TTCACTTTATGCCGTTAGTGGTTTAGGTAGCAGTAAATTAGATCTCACACAGAACTACCGCCATACTAATTATACCTATA
CTGAACACACGGCTAGCAACACGACTTCATTTGCTTATGGTGCAGGTGTACAGATTAACCCTCTGAAAAATATTGCCATC
GATATTAGCTATGAAAAAAGTAAAATCAATGCAAAAAAAATCAATGGCTTTAGTATGGGCATTGGCTATCATTTCTAA

Protein sequence : 
MKVKVMAVILALSALQASLLVHADSHALSIGYAQSRVQDFKNLRGVNLKYRYEPNSLLGVITSFSYMSAGGHEFDSLSWG
DTYYDDRIKVKYYSLLIGPSYRINKYVSLYAVSGLGSSKLDLTQNYRHTNYTYTEHTASNTTSFAYGAGVQINPLKNIAI
DISYEKSKINAKKINGFSMGIGYHF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pagC YP_216243.1 PhoP regulated protein: reduced macrophage survival Not tested SPI-11 Protein 6e-33 47
Z4321 NP_289546.1 PagC-like membrane protein Not tested OI-122 Protein 4e-28 42
unnamed ADD91732.1 putative PagC-like membrane protein Not tested PAI-I AL862 Protein 2e-28 42
Z4321 AAQ19134.1 putative PagC-like membrane protein Not tested PAI I CL3 Protein 1e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pagC YP_002649899.1 virulence membrane protein VFG0442 Protein 4e-32 44