|
Name : EpC_28900 (EpC_28900) Accession : YP_002649871.1 Strain : Erwinia pyrifoliae Ep1/96 Genome accession: NC_012214 Putative virulence/resistance : Unknown Product : hemolysin activator protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG2831 EC number : - Position : 3185955 - 3187706 bp Length : 1752 bp Strand : + Note : silverDB:cEP02891 DNA sequence : ATGGATATATCACTGCGCCGCCGGATCATCACCACCGTGCGGCAAACACTACTGATATCCCTTTGGCTTACCGTTGCCGA AGCACGGGCTGAAACCGCTCCCGCTGCCGCAACGTTGCCCGCTAAGCCATTATCTGACTCATTGATTGGGAAAGGCGATC AGCAATTAATTCATCAGCAAGATCAACAAAATGCTTTACAGAATCGCCTGAATCCGCCAGTACCGGATATTCGGCTCTCT ACGCCATCAGGTAACGTTGGTCACCTTCGTTTTCCGCAAGAAACCCCTTGTTTTACTCTTTCACGCGTGACGTTAAGCGG TACAGACGCCCTGCCCCACTGGCTACCCTTGCAGCGCATCAGCCATCAGGCGGTGGGAAAATGCCTTGGCGGACAGGGGA TTAACCTGCTGATGAGCACCCTGCAAAATCGCCTGGTTGACCACGGCTATGTGACCAGCCGGGTACTGGCCCCCGCACAG GATCTTAAAAGCGGTGAACTCAGGCTGGTGGTGGTCGCAGGTAAAACCCGACAGGTAACGCTGACGCCGGACAGTGGCCA TTACATCAGCTTATATAGCGCATTTCCGGCCCATCAAGGCCAGCTGCTGGATCTGCGTGATATTGAGCAAGGGCTGGAGA ACCTGCAGCGCCTGCCGACCGTACAGGCCGATATGGCGATCCTGCCCGCTGCCGGGCCAGGCGAAAGCGACATTGCGCTG CGCTGGCAGCAGCAGCGCATGTGGCGCGTTGCGGCCTCACTCGATGACTCCGGCACGCGCAGCACCGGCCGCTATCAGGG CGGCCTGACGCTATCGCTGGATAATCCGTTATCGCTCAGCGATATGTTTTATCTTTCTGGCAGCGGCAGTCTGCAAAGCA AAAACGGCAGAGGCTCTGACAACCTGACCGGCCACTACTCGGTGCCGTTTGGCTACTGGCTGGTAGGCCTGACAGCCAAC AGCTATGACTATCGCCAAACGGTGGCCGGGCTAAACAGCGACTACCGCTACAGCGGCAAAAGCCAAAATATGGATTTTCA GGTCAGCCGCATATTGCACCGTAACGGCAGCCAGAAAACCACGCTGACTTATGACGTGCTGGCGCGTGAATCCAGAAACT ACATAGATGATACCGAGATTGGCATTCAGCGCCGCCGCACTTCAGCGTGGCGAATGGGTTTGCAGCATCGCCACTATATT TCGCAGGCCACGCTGGATGTGGGGGCCAGTTATCAGCGCGGTACACGCTGGTTTGGCGCAATGCAGGCACCAGAAGAAAA TATGGGTGATGCCACTGCGTTAAGTAAAATCGTGCAACTTTCCGCCCAGGTTGATATTCCGTTTACCCTGCTGCGGCAAC GATTCCACTATAACCTGCAGTATCAACGCCAGCTGAGTCATACCTTACTCACGCCACAAGAGCAGTTCGCTATCGGTAAC CGCTGGACGGTACGCGGCTTTGATGGTGAAAGAACGTTGAACGCCAACCGTGGATGGCTGGTGCGTAATGACATCGCATG GGCAACGCCGCTACCGTCTCAGGAACTCTATATCGGGGTGGATTACGGTGAAGTCGGCGGAAACGGTACGCAATATCTGG CTGGTAATCATTTAGCCGGCGGCGCAATGGGGTTACGAGGCAAAGCATTACAGATGGGCTATGACCTGTTTGCTTCCGTA CCTTTCTCAAAGCCGGACGGTTTCAGAACCGATCCCGTATCACTGGGCTTTAATCTCAACTGGCAGTATTAG Protein sequence : MDISLRRRIITTVRQTLLISLWLTVAEARAETAPAAATLPAKPLSDSLIGKGDQQLIHQQDQQNALQNRLNPPVPDIRLS TPSGNVGHLRFPQETPCFTLSRVTLSGTDALPHWLPLQRISHQAVGKCLGGQGINLLMSTLQNRLVDHGYVTSRVLAPAQ DLKSGELRLVVVAGKTRQVTLTPDSGHYISLYSAFPAHQGQLLDLRDIEQGLENLQRLPTVQADMAILPAAGPGESDIAL RWQQQRMWRVAASLDDSGTRSTGRYQGGLTLSLDNPLSLSDMFYLSGSGSLQSKNGRGSDNLTGHYSVPFGYWLVGLTAN SYDYRQTVAGLNSDYRYSGKSQNMDFQVSRILHRNGSQKTTLTYDVLARESRNYIDDTEIGIQRRRTSAWRMGLQHRHYI SQATLDVGASYQRGTRWFGAMQAPEENMGDATALSKIVQLSAQVDIPFTLLRQRFHYNLQYQRQLSHTLLTPQEQFAIGN RWTVRGFDGERTLNANRGWLVRNDIAWATPLPSQELYIGVDYGEVGGNGTQYLAGNHLAGGAMGLRGKALQMGYDLFASV PFSKPDGFRTDPVSLGFNLNWQY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| S1 | AAQ19124.1 | putative hemolysin activator HlyB | Not tested | PAI I CL3 | Protein | 6e-172 | 67 |
