Gene Information

Name : rdgC (EpC_26750)
Accession : YP_002649664.1
Strain : Erwinia pyrifoliae Ep1/96
Genome accession: NC_012214
Putative virulence/resistance : Unknown
Product : recombination associated protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2974
EC number : -
Position : 2953249 - 2954160 bp
Length : 912 bp
Strand : +
Note : Required for efficient pilin antigenic variation

DNA sequence :
ATGCTGTGGTTTAAAAATTTGATGGTTTATCGTCTTAATCGCGACATTCCGCTGGTGGCAGACGAGATGGAAAAACAGCT
CGATGTTTTCTCCTTCACTCCCTGCGGAAGCCAGGATATGGCAAAAACCGGTTGGGTTTCACCGCTGGGCGCGCGCAGTG
AAGACCTGACCCATGTGACCAACGGCCAGATCCTGATTTGTGCACGCAAAGAAGAGAAGATGCTGCCTTCACCGGTGATC
AAGCAGGCGCTGGAAGCCAAAATCAGCAAGCTGGAAGCCGAACAGTCGCGCAAGCTGAAGAAAACCGAGAAAGACTCGTT
AAAAGACGAAGTGCTGCACAGCCTGCTGCCGCGTGCTTTCAGCCGTTTTAGCCAGACGTATGTCTGGATCGATACGGTTA
ATAACCTGATTATGGTTGACTGCGCCAGCGCAAAAAAAGCCGAAGATACCCTTGCCCTGCTGCGTAAGAGCCTTGGCTCG
CTACCGGTGGTGCCGCTGACGCTGGAAAGCCCGATAGAGCTGACGTTGACCGAATGGGTACGTTCCGGCGAGCTACCGGC
CGGTTTCGCCCTGATGGATGAAGCCGAGCTGGAAGCCATTCTGGAAGATGGCGGGGTGATCCGCTGTAAAAAGCAGGATC
TGGTGTGCGATGAGATAGCGAACCATATCGAAGCCGGCAAGCTGGTGACCAAACTGGCTCTCGACTGGCAGGAACGTGTC
CAGCTGATCCTGTCTGACGATGGCTCGATCAAGCGCCTGAAATTCGCCGATATCCTGCGCGAACAGAACGATGATATTGA
CAGGGAAGATGTCGCCGGACGTTTTGACGCTGATTTTGTCCTGATGACCGGCGAACTGGCCGCGTTGATTAGCAATACCG
TAGAAGCGTTAGGCGGGGAAGCACCACGTTAG

Protein sequence :
MLWFKNLMVYRLNRDIPLVADEMEKQLDVFSFTPCGSQDMAKTGWVSPLGARSEDLTHVTNGQILICARKEEKMLPSPVI
KQALEAKISKLEAEQSRKLKKTEKDSLKDEVLHSLLPRAFSRFSQTYVWIDTVNNLIMVDCASAKKAEDTLALLRKSLGS
LPVVPLTLESPIELTLTEWVRSGELPAGFALMDEAELEAILEDGGVIRCKKQDLVCDEIANHIEAGKLVTKLALDWQERV
QLILSDDGSIKRLKFADILREQNDDIDREDVAGRFDADFVLMTGELAALISNTVEALGGEAPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 6e-94 63