Gene Information

Name : ribD (EpC_26470)
Accession : YP_002649637.1
Strain : Erwinia pyrifoliae Ep1/96
Genome accession: NC_012214
Putative virulence/resistance : Unknown
Product : Riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 2922870 - 2923973 bp
Length : 1104 bp
Strand : -
Note : silverDB:cEP02648

DNA sequence :
ATGCGCGATGAAATTTATATGGCCCGGGCGCTGGAACTGGCGCGCCGTGGCCGTTTTACCACCACGCCGAATCCTAATGT
AGGATGCGTGCTGGTGCGTGATGGCCAGATCGTCGGTGAAGGCTACCATATGCTCGCCGGCGAGCCGCACGCGGAAGTAC
ACGCGCTACGCATGGCTGGTGAGAAATCGCTCGGGGCTACCGCCTATGTCACGCTGGAGCCGTGTAGCCATCACGGGCGT
ACGCCGCCGTGCTGTGAGGCGCTGATTGCGGCTGGCATTAAGCGGGTCGTTACCGCGATGCAGGATCCGAACCCGCAGGT
AGCCGGGCGCGGGCTATATCGTTTGCAGCAGGCAGGGATTGAAGTCAGCCACGGGCTGATGATGCAGGAAGCGGAAGCGC
TGAATCGTGGCTTTCTCAAACGCATGCGCACCGGTTTCCCTTGGGTACAGCTTAAGCTCGGTGCCTCCCTGGATGGGCGC
ACGGCGATGGCCAGCGGGGAAAGCCAGTGGATCACCTCTCCTGAAGCAAGACGCGATGTGCAAAGACTGCGCGCGCAAAG
CTCGGCTATCCTCAGCACCAGCGCCACCGTGCTGGCAGATAATCCGGCGCTGACCGTTCGTCACGATGAACTGGATAGCG
CCAGTCTGGCGGACTACCCGGTCGATTTGCTGCGCCAGCCGGTACGCGTCATCGTTGACGGTCAGAATCGCGTGACTCCA
GAGTATCGGCTAGTTGCCCAGCCGGGGGAGACCTGGCTGGCACGCACCTCCGGCGATCGGCAGCAGTGGCCGGAAAACGT
TAGCCAGCTGATCGTACCGCTCTATCAGAATCGCCTCGATCTGGTCTCATTACTGATGCTGCTGGGCAAAAAACAGATTA
ACAGCGTTTGGGTGGAAGCCGGAGCGCAATTTGCCGGCGCATTATTACAGGCAGGCGTCGTCGATGAACTGATCGTCTAT
CTGGCTCCTAAATTACTTGGCGATGCCGGGCGTGGCCTGTGTCAGCTGCCGGGGCTGGAAACGCTGGCCGCTGCACCTGC
CTTTACCTTTAGTGATATTCGTCAGGTAGGGCCTGATATCAGGCTCACGTTGACCCCGTCATAA

Protein sequence :
MRDEIYMARALELARRGRFTTTPNPNVGCVLVRDGQIVGEGYHMLAGEPHAEVHALRMAGEKSLGATAYVTLEPCSHHGR
TPPCCEALIAAGIKRVVTAMQDPNPQVAGRGLYRLQQAGIEVSHGLMMQEAEALNRGFLKRMRTGFPWVQLKLGASLDGR
TAMASGESQWITSPEARRDVQRLRAQSSAILSTSATVLADNPALTVRHDELDSASLADYPVDLLRQPVRVIVDGQNRVTP
EYRLVAQPGETWLARTSGDRQQWPENVSQLIVPLYQNRLDLVSLLMLLGKKQINSVWVEAGAQFAGALLQAGVVDELIVY
LAPKLLGDAGRGLCQLPGLETLAAAPAFTFSDIRQVGPDIRLTLTPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 4e-59 48
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 4e-59 48