Gene Information

Name : EpC_24530 (EpC_24530)
Accession : YP_002649449.1
Strain : Erwinia pyrifoliae Ep1/96
Genome accession: NC_012214
Putative virulence/resistance : Virulence
Product : pathogenicity island protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 2722907 - 2723863 bp
Length : 957 bp
Strand : -
Note : silverDB:cEP02454

DNA sequence : 
ATGGATAAGAAAATTCCGGTGGGGATCAGTGCCTGTCTGTTGGGCGAGCGCGTGCGCTTCGATGGTGGGCATAAACGCTG
CGAATTTGCCGCGCAGCAGCTGGCACCTTTTTTGCGCTATGAACCGATATGCCCGGAGATGGCGATTGGACTGCCAACCC
CACGCCCGGCACTGCGGCTGACCGAAGCAGCCCAGGGCGATATTTCGCTCAGTTTCAGCAACGGCAGCGACTTACCCGTC
ACGGAAAAAATGCAGGCGTTTTCCGAGAAAAAAATCAGCCAGTTGCACCATCTTTGCGGCTATATCGTCTGCGCTAAATC
CCCCAGCTGCGGGATGGAAAGGGTGCGCATCTATCAACCGGACAACAATAATAACCGTAAGGCCGGAACCGGGGTATTTA
CCCGCGAACTGATGGCGCAGATGCCCTGGCTGCCGGTCGAGGAGGATGGCCGCCTCCACGATCCGCTGCTGCGCGAGAAC
TTTGTCGCACGCGTCTATGCCCTGCACGAATTTAATCAGCTATGGCGCAGTGGGCTGACGCGCGCCAGGCTGATGGCGTT
TCACACCCGATATAAACTGTTACTGCTGGCTCATTCCCAGCCTGCCTACCGACAGATAGGCCCTTTTGTCGCCGGGATTG
GCCAATGGGCGTCGCTGGAAGCGTTTGCCCGTGAGTACCGGCTGAGGCTGATGGATCTGATGCAGCACCCGTCAACGCGC
AGTAACCATACCAATGTGCTGATGCACGTTCAGGGTTATTTCCGCCGCGAACTGACTTCCGCGCAGCGTCAGGAACTGGC
AGGAGTGATTGATGACTACCGCCAGGAGCTGTTACCGCTGCTGGCACCGATAACCCTGCTGAAACACTATATGACGCAAT
TCCCGCACCCGTGGCTGGCCGGGCAGCGCTATTTCGCGCCGTACCCGGAAGTGCTGCGTTTACGTTACGGACACTGA

Protein sequence : 
MDKKIPVGISACLLGERVRFDGGHKRCEFAAQQLAPFLRYEPICPEMAIGLPTPRPALRLTEAAQGDISLSFSNGSDLPV
TEKMQAFSEKKISQLHHLCGYIVCAKSPSCGMERVRIYQPDNNNNRKAGTGVFTRELMAQMPWLPVEEDGRLHDPLLREN
FVARVYALHEFNQLWRSGLTRARLMAFHTRYKLLLLAHSQPAYRQIGPFVAGIGQWASLEAFAREYRLRLMDLMQHPSTR
SNHTNVLMHVQGYFRRELTSAQRQELAGVIDDYRQELLPLLAPITLLKHYMTQFPHPWLAGQRYFAPYPEVLRLRYGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 2e-90 59
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 2e-90 59
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 2e-90 59
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 1e-90 59
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 2e-90 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EpC_24530 YP_002649449.1 pathogenicity island protein VFG0490 Protein 8e-91 59