Gene Information

Name : hemC (EpC_02000)
Accession : YP_002647237.1
Strain : Erwinia pyrifoliae Ep1/96
Genome accession: NC_012214
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 231602 - 232543 bp
Length : 942 bp
Strand : -
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGTCAGACAAAATTTTAAGAATTGCCACCAGGAAAAGTCCGCTAGCGCTATGGCAGGCTAAGTATGTGCAACAGCGTTT
AATCGACTGTCATCCGGGGTTGCGCGTTGAGCTGGTGCCGATGGTGACGCGTGGAGATGTGATCCTTGACACCCCGCTGG
CAAAAGTAGGTGGTAAAGGATTATTCGTGAAGGAACTGGAACAGGCCATGCTGTCAGGCAGCGCGGATATTGCCGTACAC
TCGATGAAAGATGTGCCGGTTGCCTTTCCGCAAGGGCTGGGGCTGGTCGCTATCTGCGAGCGTGACGATCCGCATGATGC
ATTCGTTTCCAACCGCCATGCGTCGGTAGACTCACTGCCACAGGGCGCAATTGTGGGCACATCAAGCCTGCGGCGTCAGT
GCCAGCTCAGCGCCCGCCGCCCGGATCTGGTCATCCACTCCCTGCGCGGCAATGTGGGTACTCGTCTCGGTAAACTGGAT
GCGGGAGAATATGATGCCATCATTCTGGCCGTCGCCGGGTTGAAACGACTGGGCCTGAGCGATCGTATCCGCCAGGTGAT
GCCCGCTGAAGAGTCGCTTCCCGCCGTTGGCCAGGGCGCGGTCGGTATTGAATGCCGCCTTGAAGACATGCACACTATCG
GTTTACTCGCGGCGTTAAATCATGATGAGACCGCTTGCCGGGTGAGCGCAGAACGCGCCATGAATACCCGTCTTGAAGGA
GGTTGCCAAGTCCCGATTGGCAGTTATGCGCTGCTGGAAGGCGACCAGCTGTGGCTGCGTGGGCTGGTTGGCTCACCGGA
CGGTAGCCAGATGGTGCGCGGCGAACGCCGGGGTTCGCGAGCGGATGCTGAAAAAATGGGCATCTCACTGGCCGAAGAGC
TGCTGGATAATGGCGCGCGCGACATTCTCGCCGCCGTTTATCAGGGAAATCCGCCAGCATGA

Protein sequence :
MSDKILRIATRKSPLALWQAKYVQQRLIDCHPGLRVELVPMVTRGDVILDTPLAKVGGKGLFVKELEQAMLSGSADIAVH
SMKDVPVAFPQGLGLVAICERDDPHDAFVSNRHASVDSLPQGAIVGTSSLRRQCQLSARRPDLVIHSLRGNVGTRLGKLD
AGEYDAIILAVAGLKRLGLSDRIRQVMPAEESLPAVGQGAVGIECRLEDMHTIGLLAALNHDETACRVSAERAMNTRLEG
GCQVPIGSYALLEGDQLWLRGLVGSPDGSQMVRGERRGSRADAEKMGISLAEELLDNGARDILAAVYQGNPPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-82 61
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-82 61