Gene Information

Name : ldcA (EpC_20230)
Accession : YP_002649029.1
Strain : Erwinia pyrifoliae Ep1/96
Genome accession: NC_012214
Putative virulence/resistance : Unknown
Product : Muramoyltetrapeptide carboxypeptidase A
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1619
EC number : 3.4.17.13
Position : 2279177 - 2280121 bp
Length : 945 bp
Strand : +
Note : silverDB:cEP02024

DNA sequence :
ATGAGCATCACGCCACGCACTATTCGTCTGGTCGCCCCATCAGGCTACTGCCAAAATCAGTCAGCTGCGGCACGCGGTAT
AGCCCGCCTGCAGGCTCTTGGCCACAGGGTCGAAAATAGCGGCATTATCACCCGCCGCGATCGGCGCTTCGCTGGTAACG
ATAACCAGCGTCTGCAGGATATTAACGAGCTGGCGCACCTCGATACGCTGCCGGATATTGTGCTGGCGGTGCGCGGCGGC
TATGGTGCCAGTCGCCTGTTAGCCAACATCGACTATCCTGCGTTACGCCAGCGCCTGCACGCTGCGCCGTTGGCTATTTG
TGGCCACAGTGACTTCACCGCCATTCAGCTTGCCCTGCTGGCACAAAGTGGCGTGCAAAGCTTTAGCGCGCCGATGCTGA
CCGGGAATTTTGGCGCTGAGGTCGTGTCTGAATTTACCGTTAGCCATTTTTGGCAGGCGCTAACGACGCCTGAAATGACG
CTTAGATGGACAACGTTGCCGCAGCAACTTCAGGTCAGTGGCACCGTGTGGGGAGGTAACCTGGCGATGATTGCTGCGAT
GATCGGTACTGCCTGGATGCCCGATATTCAACAGGGCATTTTGGTGATTGAGGATGTCAATGAACCCCCTTTCCGCATTG
AACGCATGCTGCTTCAACTGCACCACAGCGGCATTCTGGCCCGTCAGAGAGCCATAGTGACCGGCAGCTTTAGCGGAACG
ACCTCACCCACTTACGACAGCGGCTACGATTTTAACAGTGTCTGGAACTTGATTCGCGATCTGACCGGTCTACCCGTGGT
GAACGGGCTGCCGTTTGGACATGATGCCGACACCGTCACGCTGCCAGTTGGTGCGCAGGGTTTGCTGAAGGTGGATGAAA
CGTCTGCTACGCTGCGGCTATCAGGATATCCTGTACTGCGCCAGCTGCCAGGAGACCGGGCATGA

Protein sequence :
MSITPRTIRLVAPSGYCQNQSAAARGIARLQALGHRVENSGIITRRDRRFAGNDNQRLQDINELAHLDTLPDIVLAVRGG
YGASRLLANIDYPALRQRLHAAPLAICGHSDFTAIQLALLAQSGVQSFSAPMLTGNFGAEVVSEFTVSHFWQALTTPEMT
LRWTTLPQQLQVSGTVWGGNLAMIAAMIGTAWMPDIQQGILVIEDVNEPPFRIERMLLQLHHSGILARQRAIVTGSFSGT
TSPTYDSGYDFNSVWNLIRDLTGLPVVNGLPFGHDADTVTLPVGAQGLLKVDETSATLRLSGYPVLRQLPGDRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
f304 AAC61707.1 F304 Not tested PAI I CFT073 Protein 1e-82 56