Gene Information

Name : EpC_20090 (EpC_20090)
Accession : YP_002649015.1
Strain : Erwinia pyrifoliae Ep1/96
Genome accession: NC_012214
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911, orf A
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2261924 - 2262223 bp
Length : 300 bp
Strand : -
Note : silverDB:cEP02010

DNA sequence :
ATGACAAAACCAGCATCAACCAGCAAAAAGCCACGCAAACAACATACGCCTGAATTTCGCAACGAAGCCCTGAAACTTGC
TGAGCGTATCGGTGTGGCTCCAGCTGCCCGTGAACTCCGTCTGTATGAATCGCAGCTTTATGCCTGGCGCAGCAAGCTCA
AAAATGCACATTCCTCTTCTGAACGTGAGCAGGAAATGTCTGTTGAAATTGCCCGCCTTAAGCGGCAACTGGCGGAGCAG
GCTGAGGAGCTGGCCATTCTCCAAAAGGCCGTGACATACTTCGCGAAGCGCCTGAAATGA

Protein sequence :
MTKPASTSKKPRKQHTPEFRNEALKLAERIGVAPAARELRLYESQLYAWRSKLKNAHSSSEREQEMSVEIARLKRQLAEQ
AEELAILQKAVTYFAKRLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SF3703 NP_709442.1 IS3 ORF1 Not tested SHI-2 Protein 6e-31 83
unnamed AAT48700.1 transposon-related Not tested PAI II 4787 Protein 2e-30 83
yis1_SHISO CAD66178.1 hypothetical protein of insertion element IS1 Not tested PAI III 536 Protein 2e-30 83
S4064 NP_839234.1 IS3 orfA Not tested SHI-2 Protein 6e-31 83
ECO111_3733 YP_003236069.1 putative IS3 transposase InsE Not tested LEE Protein 2e-33 82
unnamed AAC28568.1 YIS1_SHISO Not tested LEE Protein 1e-33 82
unnamed AAL57518.1 transposase 2 Not tested LEE Protein 1e-33 82
unnamed AAL57580.1 transposase 2 Not tested LEE Protein 1e-33 82

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EpC_20090 YP_002649015.1 transposase IS3/IS911, orf A VFG0603 Protein 2e-31 83
EpC_20090 YP_002649015.1 transposase IS3/IS911, orf A VFG1632 Protein 8e-31 83