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Name : spaP (EpC_19880) Accession : YP_002648994.1 Strain : Erwinia pyrifoliae Ep1/96 Genome accession: NC_012214 Putative virulence/resistance : Virulence Product : surface presentation of antigens protein SpaP Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4790 EC number : - Position : 2242830 - 2243501 bp Length : 672 bp Strand : - Note : part of a type III secretory system probably involved in invasion into eukaryotic cells DNA sequence : ATGCTGAATAATGACATTTCCTTAATTGGCGTACTTTCTTTTTTTACGTTGCTTCCATTCCTTATTGCAGGTGGTACTTG TTTCATCAAATTTTCAATTGTATTAGTGATGATGCGCAATGCATTAGGAATCCAGCAAGTACCTTCTAACCTTACCCTCA ATGGAATTGCACTTATTTTAAGCGCATTTGTAATGATGCCTGTATGTCAGCGTATTGCTGATGATGTTGAAAGCCGGCAT ATTGATTTTAATCAAAGTGGAGCTATTCCACAGTTGATGGATGATGGGTTGGGGAGCTATCGTGAATATCTGGTGCATTA TTCCGACCATGATTTGATTCATTTTTTTAATAAAGTTCAAAAGAAAAGAAATGATGACAATGAAGTCGATATTACTGAAC ATGAATTGAGAAGATTACCATTAATGACTTTGATGCCTGCTTACGCACTAAGTGAAATTCAAAGCGCATTCAAGATTGCT TTTTATATTTATATTCCCTTCGTTGTAATAGATATGGTTGTGTCCAGTATTTTACTGGCATTAGGTATGATGATGATGAG TCCGGTGACCATCTCTATTCCAATAAAACTGATTCTTTTTGTTGCAATGGATGGTTGGAGCTTATTGGCGAAAGGGCTTA TCACACAATATGCTGACCTAATGACATCATGA Protein sequence : MLNNDISLIGVLSFFTLLPFLIAGGTCFIKFSIVLVMMRNALGIQQVPSNLTLNGIALILSAFVMMPVCQRIADDVESRH IDFNQSGAIPQLMDDGLGSYREYLVHYSDHDLIHFFNKVQKKRNDDNEVDITEHELRRLPLMTLMPAYALSEIQSAFKIA FYIYIPFVVIDMVVSSILLALGMMMMSPVTISIPIKLILFVAMDGWSLLAKGLITQYADLMTS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ysaR | AAS66846.1 | YsaR | Not tested | SSR-1 | Protein | 2e-72 | 70 |
| spaP | NP_461811.1 | surface presentation of antigens protein SpaP | Virulence | SPI-1 | Protein | 1e-58 | 59 |
| spaP | NP_457284.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 4e-58 | 59 |
| spaP | NP_806493.1 | surface presentation of antigens protein SpaP | Virulence | SPI-1 | Protein | 4e-58 | 59 |
| spaP | YP_217809.1 | surface presentation of antigens protein SpaP | Virulence | SPI-1 | Protein | 1e-58 | 59 |
| spaP | NP_311752.1 | surface presentation of antigens protein SpaP | Not tested | LIM | Protein | 1e-66 | 59 |
| epaP | AAZ31293.1 | EpaP | Virulence | ETT2 | Protein | 2e-65 | 58 |
| spaP | AAS66865.1 | SpaP | Not tested | SSR-2 | Protein | 6e-59 | 51 |
| unnamed | AAL06354.1 | EscR | Virulence | LEE | Protein | 9e-42 | 42 |
| escR | AAC38369.1 | EscR | Virulence | LEE | Protein | 2e-41 | 41 |
| escR | YP_003236103.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 4e-42 | 41 |
| escR | NP_290283.1 | type III secretion system protein | Virulence | LEE | Protein | 4e-42 | 41 |
| escR | AAC31528.1 | L0049 | Virulence | LEE | Protein | 3e-42 | 41 |
| ECs4583 | NP_312610.1 | type III secretion system protein | Virulence | LEE | Protein | 3e-42 | 41 |
| escR | ACU09473.1 | type III secretion system protein EscR | Virulence | LEE | Protein | 3e-42 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| spaP | YP_002648994.1 | surface presentation of antigens protein SpaP | VFG0551 | Protein | 5e-59 | 59 |
| spaP | YP_002648994.1 | surface presentation of antigens protein SpaP | VFG2455 | Protein | 2e-60 | 58 |
| spaP | YP_002648994.1 | surface presentation of antigens protein SpaP | VFG1773 | Protein | 4e-65 | 58 |
| spaP | YP_002648994.1 | surface presentation of antigens protein SpaP | VFG1012 | Protein | 1e-59 | 56 |
| spaP | YP_002648994.1 | surface presentation of antigens protein SpaP | VFG0394 | Protein | 9e-38 | 42 |
| spaP | YP_002648994.1 | surface presentation of antigens protein SpaP | VFG0044 | Protein | 7e-40 | 41 |
| spaP | YP_002648994.1 | surface presentation of antigens protein SpaP | VFG0827 | Protein | 2e-42 | 41 |
| spaP | YP_002648994.1 | surface presentation of antigens protein SpaP | VFG0715 | Protein | 1e-41 | 41 |
