Gene Information

Name : sicA (EpC_19840)
Accession : YP_002648990.1
Strain : Erwinia pyrifoliae Ep1/96
Genome accession: NC_012214
Putative virulence/resistance : Virulence
Product : type III secretion chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2239979 - 2240536 bp
Length : 558 bp
Strand : -
Note : silverDB:cEP01985

DNA sequence : 
ATGGAATATGAGAATATAGCGAAAGATTCGAACGCTCAAAATCAATCCCAAAACGATGATGAACTGGAAGAATTCTCTGA
TAATCTCATTGAAGCGATCCAGCATGGCGCTGTTCTTAAAGATGTGCAGGGTGTTACTAATGATACGATGAACGATATCT
ATAAAATAGCGTACGAATTTTATCATCTAGGTAGATTAGACGACGCTGAATCTCTTTTTCGTTTTTTATGTATCTATGAT
TTTTATAACTCTGAGTATGCCATGGGTCTTGCCGCAGTTTATCATTTAAAAAAGAATTACCGCAAAGCTATAGATTTCTA
TGCTTTGGCTTATTCTTTATCAAATGAGGATTACCGACCCATGTTTTATGCCGGGCAGTGTAATTTATTGTTGCGTCAAG
AAGTTCTGGCTAGAAAATGTTTTACTATTGTTATGAACAAGTGCACCATTATACAGCTTAAAGAAAAAGCAGAAAAGTAT
CTGTCAGCACTCGATGAAATGAGTGCAGATACAAACATGAATACTGAAAATAAAAGTAATAAACAGGAGGCACAATGA

Protein sequence : 
MEYENIAKDSNAQNQSQNDDELEEFSDNLIEAIQHGAVLKDVQGVTNDTMNDIYKIAYEFYHLGRLDDAESLFRFLCIYD
FYNSEYAMGLAAVYHLKKNYRKAIDFYALAYSLSNEDYRPMFYAGQCNLLLRQEVLARKCFTIVMNKCTIIQLKEKAEKY
LSALDEMSADTNMNTENKSNKQEAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sicA NP_461807.1 secretion chaperone Virulence SPI-1 Protein 2e-38 49
sicA YP_217805.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 2e-38 49
spaT NP_457280.1 unknown function Virulence SPI-1 Protein 2e-38 49
spaT NP_806489.1 hypothetical protein Virulence SPI-1 Protein 2e-38 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sicA YP_002648990.1 type III secretion chaperone VFG2451 Protein 2e-45 55
sicA YP_002648990.1 type III secretion chaperone VFG0547 Protein 6e-39 49
sicA YP_002648990.1 type III secretion chaperone VFG0988 Protein 2e-37 47
sicA YP_002648990.1 type III secretion chaperone VFG1769 Protein 2e-36 44