Gene Information

Name : sitB (EpC_14790)
Accession : YP_002648491.1
Strain : Erwinia pyrifoliae Ep1/96
Genome accession: NC_012214
Putative virulence/resistance : Virulence
Product : Iron transport protein ATP-binding component
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 1691796 - 1692599 bp
Length : 804 bp
Strand : -
Note : silverDB:cEP01480

DNA sequence : 
ATGAACATTAGCGCCGCACGTCAGAACGGCATTGAGGTTGCTAACCTGACGGTCACCTATCGCAACGGGCACACTGCCCT
GCGCGCCGCCTCATTACAGATCCCCACCGCCAGCATTGCTGCGCTGCTCGGGATCAACGGTTCCGGGAAATCGACGCTGT
TTAAAGCCATTATGGGCTTTGTCCCCCCCTCGTCCGGAACGATTACTCTGCTGGATCAACCGTGGCACAGGGCGCTAAAA
AACAACCTGGTGTCATATGTTCCGCAGTCCGAGGATGTCGACTGGTCGTTTCCGGTACTGGTCGAGGACGTGGTAATGAT
GGGTCGTTACGGGCATATGGGCATGCTGCGCATTGCCCGCGCCGAAGACAAACGCCTGGTCGCTGCGGCTCTGGAGCGAG
TTGGCATGACAGACTTCCGCCGTCGTCAAATCGGTGAACTGTCCGGCGGGCAGAAAAAACGCGTCTTTCTCGCTCGCGCT
ATCGCACAACGTGGTCAGGTGATCCTGCTGGATGAACCATTTACCGGCGTCGACGTCAATACCGAGCGCCAGATCGTCAA
CCTGCTGCATGAGCTGCGCGACGAAGGGCGCACCATGCTGGTCTCTACCCACAACCTGGCTTCCGTCACTGACTATTGTG
ACCACACGGTTATCGTCAAAGGTACGGTGCTGGCCTGCGGCCCCACTGCCACCACCTTTACCCGTAGCAACCTGGAGAAT
GCCTTTAGCGGTGAGTTGCGCGATCTGGTGTTTAACGACGCTGACCCTCTGCCGGCGCTCTCACTCGTTCAGGGGGACCG
CTGA

Protein sequence : 
MNISAARQNGIEVANLTVTYRNGHTALRAASLQIPTASIAALLGINGSGKSTLFKAIMGFVPPSSGTITLLDQPWHRALK
NNLVSYVPQSEDVDWSFPVLVEDVVMMGRYGHMGMLRIARAEDKRLVAAALERVGMTDFRRRQIGELSGGQKKRVFLARA
IAQRGQVILLDEPFTGVDVNTERQIVNLLHELRDEGRTMLVSTHNLASVTDYCDHTVIVKGTVLACGPTATTFTRSNLEN
AFSGELRDLVFNDADPLPALSLVQGDR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-84 71
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 8e-85 71
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 9e-84 71
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 9e-84 71
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-84 71

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitB YP_002648491.1 Iron transport protein ATP-binding component BAC0350 Protein 5e-85 71
sitB YP_002648491.1 Iron transport protein ATP-binding component BAC0440 Protein 2e-74 62
sitB YP_002648491.1 Iron transport protein ATP-binding component BAC0400 Protein 5e-47 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitB YP_002648491.1 Iron transport protein ATP-binding component VFG0526 Protein 5e-85 71