Gene Information

Name : sitC (EpC_14780)
Accession : YP_002648490.1
Strain : Erwinia pyrifoliae Ep1/96
Genome accession: NC_012214
Putative virulence/resistance : Virulence
Product : Iron transport protein, inner membrane component
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 1690939 - 1691796 bp
Length : 858 bp
Strand : -
Note : silverDB:cEP01479

DNA sequence : 
ATGGCATGGCTGACTGAACCTTTCCACTACCAATATATGCTTAATGCAATGTGGGTTTCAGCGCTGGTGGGCGGCGTTTG
CGCCTTTCTTTCCTGCTACCTGATGCTAAAGGGCTGGTCATTAATCGGTGACGCGCTGTCGCACTCGATCGTTCCGGGCG
TGGCTGGCGCCTGGATGCTGGGGCTGCCTTTCGCTCTCGGGGCTTTTCTCTCCGGAGGTCTTGCAGCGGGCAGTATGCTG
TTTCTGAACCAGCGCACACGTCTGAAGGAGGATGCGATTATCGGGCTAATCTTCTCTTCCTTCTTTGGCATCGGCCTATT
TATGGTTTCTCTTAATCCCACTGCGGTAAATATTCAGACCATTGTACTCGGCAATATTCTGGCCATTGCGCCAGAGGATA
TTTTACAGCTCGCCATCATTGGCTTCACTTCGCTGCTGATATTATTGATGAAGTGGAAAGATTTGATGGTGACTTTCTTT
GATGAGAATCACGCCCGCTCGGTGGGTCTTAACCCGACGCGCCTCAAGCTGTTGTTTTTCACCCTGCTGGCAGCCTGCAC
CATTGCCGCCCTGCAAACCGTTGGCGCTTTCCTGGTGATCTGCCTGGTGGTGACGCCCGGCGCCACCGCTTATCTGCTTA
CCGACCGTTTCCCGTCGCTGCTGATGATTGCGGTCGTTATCGGCAGCGTCACCAGCTTCTTCGGCGCATGGGTAAGCTAC
TACCTTGATGGCGCTACCGGGGGCATTATTGTTGTGGCACAGACGCTGGTGTTTCTGACTGCCTTTGTGCTGGCACCTAA
ACACGGCCTGCTGGCACGGCGCAAACGTGTAGCGCTGTCAGAACAGGGGGCATTATGA

Protein sequence : 
MAWLTEPFHYQYMLNAMWVSALVGGVCAFLSCYLMLKGWSLIGDALSHSIVPGVAGAWMLGLPFALGAFLSGGLAAGSML
FLNQRTRLKEDAIIGLIFSSFFGIGLFMVSLNPTAVNIQTIVLGNILAIAPEDILQLAIIGFTSLLILLMKWKDLMVTFF
DENHARSVGLNPTRLKLLFFTLLAACTIAALQTVGAFLVICLVVTPGATAYLLTDRFPSLLMIAVVIGSVTSFFGAWVSY
YLDGATGGIIVVAQTLVFLTAFVLAPKHGLLARRKRVALSEQGAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-86 84
sitC NP_461784.1 permease Virulence SPI-1 Protein 2e-86 84
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-86 84
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-86 84
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 1e-86 84

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitC YP_002648490.1 Iron transport protein, inner membrane component BAC0351 Protein 8e-87 84
sitC YP_002648490.1 Iron transport protein, inner membrane component BAC0441 Protein 2e-68 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitC YP_002648490.1 Iron transport protein, inner membrane component VFG0527 Protein 7e-87 84