Gene Information

Name : EpC_11790 (EpC_11790)
Accession : YP_002648204.1
Strain : Erwinia pyrifoliae Ep1/96
Genome accession: NC_012214
Putative virulence/resistance : Unknown
Product : transposase, orf B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1370299 - 1370598 bp
Length : 300 bp
Strand : -
Note : silverDB:cEP01180

DNA sequence :
ATGACAAAACCAGCATCAACCAGCAAAAAGCCACGCAAACAACATACGCCTGAATTTCGCAACGAAGCCCTGGAACTTGC
TGAGCGTATCGGTGTGGCTCCAGCTGCCCGTGAACTCCGTCTGTATGAATCGCAGCTTTATGCCTGGCGCAGCAAGCTCA
AAAATGCACATTCCTCTTCTGAACGTGAGCAGGAAATGTCTGTTGAAATTGCCCGCCTTAAGCGGCAACTGGCGGAGCAG
GCTGAGGAGCTGGCCATTCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGA

Protein sequence :
MTKPASTSKKPRKQHTPEFRNEALELAERIGVAPAARELRLYESQLYAWRSKLKNAHSSSEREQEMSVEIARLKRQLAEQ
AEELAILQKAATYFAKRLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S4064 NP_839234.1 IS3 orfA Not tested SHI-2 Protein 1e-30 83
SF3703 NP_709442.1 IS3 ORF1 Not tested SHI-2 Protein 1e-30 83
unnamed AAT48700.1 transposon-related Not tested PAI II 4787 Protein 4e-30 83
yis1_SHISO CAD66178.1 hypothetical protein of insertion element IS1 Not tested PAI III 536 Protein 4e-30 83
unnamed AAL57580.1 transposase 2 Not tested LEE Protein 3e-33 82
ECO111_3733 YP_003236069.1 putative IS3 transposase InsE Not tested LEE Protein 4e-33 82
unnamed AAC28568.1 YIS1_SHISO Not tested LEE Protein 3e-33 82
unnamed AAL57518.1 transposase 2 Not tested LEE Protein 3e-33 82

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EpC_11790 YP_002648204.1 transposase, orf B VFG0603 Protein 3e-31 83
EpC_11790 YP_002648204.1 transposase, orf B VFG1632 Protein 2e-30 83