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Name : kpsC (EpC_09770) Accession : YP_002648006.1 Strain : Erwinia pyrifoliae Ep1/96 Genome accession: NC_012214 Putative virulence/resistance : Virulence Product : KpsC protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3563 EC number : - Position : 1120165 - 1122189 bp Length : 2025 bp Strand : + Note : silverDB:cEP00978 DNA sequence : ATGATTGGCATTTATTCTTCCGGCATCTGGCGTATTCCTTATCTGGCCAACTTTTTGCGTGAGCGTTGCCACAAAGTTGC GCTGCGCCATGCCCTACCCGCAGAGGTAGATGCAATCGCCGTATGGGGCTATCGTCCATCCGGTAAAAAGGAGGTTCGGG CTGCCCAATCCGCCGGTAAGACCCTGATGCGACTTGAGGACGGTTTTATCCGTTCGCTGGGACTGGGTGTAGAAGGCGCG TCGCCATTTTCCATGGTCGTTGATCGTCTTGGCATGTACTACGATGCAGGACGCCCCAGTACGCTTGAACGTTTGATTCA GGACACGCCAGGTAGCAGCGTGCTGGTAGCGGAAGCGGAAGACGCCATGCGTACCATCGTTAACGAAGATCTTTCCAAAT TCAATCACGCTCTGCCGTTTAAACGCACAACGCCGATGCCGTCTGACGTGGTGCTGGTGGTGGATCAAACCGCTGGCGAT CTGTCAGTCAAGTGGGGCGGTGGCGGAGCGACCGATTTTACCCGCATGGTGAATGCAGCGCTGAGCGAAAATCCTTACGC GACAATCTGGGTCAAGGTTCATCCTGATGTACTGAGTGGTTCTAAGCAGGGCTATTTGGGGGCGGTAGAGTTGGATGAAC GAGTCCATCTGTTCACTGAAGATGTCAGCCCGCAGTCTTTGCTACGCGTGGTGACTAAAGTCTATGTTGTCACCTCGCAG TTAGGTTTCGAGGCGTTGCTGGCGGGTAAACCGGTAGTGTGTTTTGGTCTGCCGTGGTATTCCGCCTGGGGGCTGACCGA CGACCGCCATTCTGGAGCCGCCTGCCTGGCGGAACGACGGGGGCGCGCCTCACTGACCGCGCTGTTTACCGCCGCCTATT TGCGGTATAGCCGTTATATTCATCCCGCAAGCGGGCAACCGGCGAGACTGACCGAGGTCCTTGAGTGGCTGGTGCGTGAG CGCCGGCACGGCCTGCAACGTGTCGGGCATCTATGGGCGCCCGGGCTTCCGCTGTGGAAAGCGACGATGGTGAAGCCATT TTTGCACACGCGTGATAATCAGTTGACCATGGCCAGGCGTTGCCGACCGGCAGAAGCCTGCGTGGTTTGGGGGATCAAAG GAGAGCATCGCTGGGGCAGATTGGCACAACAGCGCGGTATTCCCGTCTGGCGCATGGAAAATGGCCTGCTGCGTTCCAGT GGACACGGGGCAGCTCAGAAGCCGCCGCTGTCGCTGGTGCTTGATAAACAGGGCATTTATTACGATGCGCGTCGCCCGAG CGATCTGGAACAGATGCTGAATAACAGTCAGCTGTCAGCGCAACAAGCGACAAGAGCGCAGCGGCTTCATCAGCGGCTGG TGGAGCAGCGCACCGTTAAACAAGACGTTGACCATTTTCAACTGCCCGCCGCCGCCGCTAATCGCCTAGCGATACTGGTA CTGGGCCAGGTGGAAGACGATATTTCGCTTGCCACCGGCGCGCTCGGGGTGCGTACCAATCATGATTTATTGCACCGCGT GCGAGAAAACTATCCCCAGGCATTTATTTTTTATAAGCCACATCCGAACGCGCTGGCGGGGGATCTGAAGGGGGATATTT CACCTGATGCACTGAGCCGCCTGGCGGATTTCGACGCGCGCGACGTCGATATTATCCCGTGCATCATGCAGGCAGATGAA GTGCACACCATGACTTCACTGTGGGGATTTGAAGCGCTGCTGCACGGAAAACGTGTTCATTGCTACGGATTGCCTTTCTA TGCAGGCTGGGGGCTAACGGACGATGAATTACCCTGCGCCCGCCGCACGCGCAAACTGACGCCAAACGATCTGATTTATC AAGGACTGATCGCTTATCCCACCTATCTTGATCCACATACCTATACGGTGATTAGCCCTGAGGATGCGGTGGCAATACTA GTCGAAGCGCCGCATGGCAGGCCGTGCACCATGAAAAAAATTCGCCGCAGGCTCAGGCACTATTTCCGCCAGCTAATGAT GTTTATCAAGCTCAGGCTGTTCTGA Protein sequence : MIGIYSSGIWRIPYLANFLRERCHKVALRHALPAEVDAIAVWGYRPSGKKEVRAAQSAGKTLMRLEDGFIRSLGLGVEGA SPFSMVVDRLGMYYDAGRPSTLERLIQDTPGSSVLVAEAEDAMRTIVNEDLSKFNHALPFKRTTPMPSDVVLVVDQTAGD LSVKWGGGGATDFTRMVNAALSENPYATIWVKVHPDVLSGSKQGYLGAVELDERVHLFTEDVSPQSLLRVVTKVYVVTSQ LGFEALLAGKPVVCFGLPWYSAWGLTDDRHSGAACLAERRGRASLTALFTAAYLRYSRYIHPASGQPARLTEVLEWLVRE RRHGLQRVGHLWAPGLPLWKATMVKPFLHTRDNQLTMARRCRPAEACVVWGIKGEHRWGRLAQQRGIPVWRMENGLLRSS GHGAAQKPPLSLVLDKQGIYYDARRPSDLEQMLNNSQLSAQQATRAQRLHQRLVEQRTVKQDVDHFQLPAAAANRLAILV LGQVEDDISLATGALGVRTNHDLLHRVRENYPQAFIFYKPHPNALAGDLKGDISPDALSRLADFDARDVDIIPCIMQADE VHTMTSLWGFEALLHGKRVHCYGLPFYAGWGLTDDELPCARRTRKLTPNDLIYQGLIAYPTYLDPHTYTVISPEDAVAIL VEAPHGRPCTMKKIRRRLRHYFRQLMMFIKLRLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsC | YP_854335.1 | capsule polysaccharide export protein KpsC | Not tested | PAI I APEC-O1 | Protein | 0.0 | 58 |
| kpsC | AAZ04470.1 | capsule polysaccharide export protein | Virulence | PAI I APEC-O1 | Protein | 0.0 | 58 |
| lipA | NP_273145.1 | capsule polysaccharide modification protein | Not tested | IHT-A | Protein | 3e-130 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| kpsC | YP_002648006.1 | KpsC protein | VFG0259 | Protein | 1e-130 | 44 |
| kpsC | YP_002648006.1 | KpsC protein | VFG0692 | Protein | 9e-125 | 44 |
| kpsC | YP_002648006.1 | KpsC protein | VFG0704 | Protein | 4e-111 | 44 |
