Gene Information

Name : JTY_3405 (JTY_3405)
Accession : YP_002646449.1
Strain : Mycobacterium bovis Tokyo 172
Genome accession: NC_012207
Putative virulence/resistance : Resistance
Product : transcriptional regulatory protein
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 3710453 - 3710893 bp
Length : 441 bp
Strand : +
Note : probably MerR-family

DNA sequence :
ATGAAGATCAGCGAGGTAGCCGCGCTCACCAACACCAGCACCAAGACCCTCCGCTTCTACGAGAACTCGGGGCTGCTGCC
GCCGCCTGCACGCACAGCATCGGGGTATCGCAACTATGGACCCGAGATCGTGGATCGGCTGCGGTTTATCCATCGGGGCC
AAGCGGCCGGGCTGGCATTACAGGAAGTACGCCAAATCCTGGCCATCCACGACCGCGGCGAGGCGCCGTGCGCACACGTC
CGCCAACTACTGAGCACCCGCATCGACGAAGTCCGCGCGCAGATCGCCGAACTGATTGCCCTCGAAGGCCACTTGCAGAC
CCTGCTTGACCACGCTTCATATGGCCCGCCCACCGAACACGACCACTCCACGGTGTGTTGGATCCTGGAAAGCGACCTCG
ATGAGCCCACCGCCATCGAGGTCAGCGACATTCACGCCTAG

Protein sequence :
MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLALQEVRQILAIHDRGEAPCAHV
RQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEHDHSTVCWILESDLDEPTAIEVSDIHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 1e-19 42
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 1e-19 42
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 1e-19 42
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 1e-19 42
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 1e-19 42
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 1e-19 42
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 1e-19 42