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Name : kdpB (JTY_1060) Accession : YP_002644119.1 Strain : Mycobacterium bovis Tokyo 172 Genome accession: NC_012207 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.12 Position : 1155870 - 1157999 bp Length : 2130 bp Strand : + Note : One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions DNA sequence : GTGATGATCGCACGCATGGAGACCTCCGCAACCGCCGCGGCAGCGACGTCGGCACCCCGGCTCCGGCTGGCCAAGCGCTC GCTGTTCGATCCGATGATTGTGCGCTCGGCGCTGCCCCAGAGCCTGCGCAAGCTGGCTCCGCGGGTACAGGCCCGTAACC CGGTCATGTTGGTCGTGCTGGTCGGTGCCGTGATCACCACACTGGCGTTCCTGCGCGACCTCGCATCCTCGACAGCCCAA GAGAACGTCTTCAACGGTCTGGTCGCCGCGTTCCTCTGGTTCACCGTCCTGTTTGCCAACTTTGCCGAGGCCATGGCCGA AGGACGCGGCAAGGCTCAGGCGGCGGCGCTGCGCAAAGTCCGGTCCGAAACGATGGCCAACCGGCGCACGGCTGCGGGCA ACATCGAATCGGTCCCTTCGTCGCGGCTGGACCTCGACGACGTGGTGGAGGTTTCGGCTGGCGAAACGATCCCGTCGGAC GGCGAGATCATCGAAGGCATTGCCTCCGTCGACGAGTCTGCGATCACCGGCGAATCGGCACCGGTGATCCGCGAGTCGGG CGGCGACCGTTCCGCGGTGACGGGTGGCACCGTGGTGCTGTCGGATCGGATCGTCGTGCGGATCACCGCCAAGCAGGGAC AAACATTCATCGACCGGATGATCGCGCTGGTGGAGGGCGCCGCACGGCAGCAGACACCGAACGAGATCGCGCTGAACATC CTGCTGGCTGGGCTGACGATCATCTTTTTGCTCGCGGTGGTGACGCTGCAGCCGTTCGCCATCTATTCCGGCGGGGGACA GCGGGTGGTCGTGCTGGTGGCGTTGCTGGTGTGTCTCATTCCGACCACGATCGGTGCGCTGCTGTCCGCGATCGGCATCG CGGGGATGGACCGGCTGGTGCAACACAACGTGCTCGCCACATCTGGGCGGGCGGTGGAGGCGGCCGGCGACGTGAACACG CTGCTGCTGGACAAGACCGGCACCATCACCCTCGGTAACCGGCAGGCCACCGAGTTCGTGCCGATCAACGGTGTGAGTGC CGAGGCGGTCGCCGACGCCGCCCAGCTGTCGAGCTTGGCCGACGAAACTCCGGAGGGCCGCTCGATCGTCGTGCTGGCGA AGGACGAGTTCGGGCTGCGCGCCCGCGACGAGGGCGTGATGTCACACGCCAGGTTCGTGCCGTTCACCGCCGAAACCCGG ATGTCCGGGGTCGATCTCGCCGAGGTTAGCGGCATCCGTCGGATCCGCAAGGGTGCCGCGGCTGCGGTGATGAAGTGGGT TCGCGATCACGGTGGCCACCCCACCGAGGAGGTGGGTGCCATTGTCGACGGCATCAGCTCCGGCGGGGGGACACCCCTAG TCGTTGCGGAATGGACCGATAACAGCAGCGCGCGGGCCATCGGCGTCGTCCATCTGAAGGACATCGTCAAGGTGGGCATA CGGGAACGCTTCGACGAAATGCGCCGAATGAGCATCCGCACCGTGATGATCACCGGTGACAACCCGGCGACCGCCAAGGC GATTGCACAGGAGGCCGGCGTCGACGATTTCTTGGCCGAGGCCACGCCCGAGGACAAGCTTGCGCTCATCAAGCGCGAAC AGCAGGGCGGTCGGCTGGTCGCCATGACGGGTGACGGGACCAATGACGCACCCGCGCTCGCGCAAGCCGATGTCGGGGTG GCGATGAATACCGGCACCCAGGCGGCCCGGGAAGCCGGCAACATGGTCGATCTCGACTCCGACCCCACCAAGCTCATCGA GGTCGTGGAGATCGGCAAGCAGCTGCTGATCACGCGGGGCGCGCTGACGACGTTTTCGATCGCCAACGACGTCGCGAAGT ACTTCGCCATCATCCCTGCCATGTTCGTCGGCCTGTATCCGGTGCTCGACAAGCTGAACGTCATGGCGCTGCACTCACCA AGGTCGGCGATTCTGTCGGCGGTCATCTTCAATGCGCTGGTGATCGTCGCCTTGATCCCATTGGCGTTGCGGGGCGTGCG GTTTAGGGCGGAAAGCGCGTCGGCGATGCTGCGGCGCAACCTGCTGATCTATGGGCTGGGCGGTCTCGTCGTCCCGTTTA TCGGCATTAAACTGGTCGATCTCGTCATCGTCGCCCTCGGGGTGTCCTGA Protein sequence : MMIARMETSATAAAATSAPRLRLAKRSLFDPMIVRSALPQSLRKLAPRVQARNPVMLVVLVGAVITTLAFLRDLASSTAQ ENVFNGLVAAFLWFTVLFANFAEAMAEGRGKAQAAALRKVRSETMANRRTAAGNIESVPSSRLDLDDVVEVSAGETIPSD GEIIEGIASVDESAITGESAPVIRESGGDRSAVTGGTVVLSDRIVVRITAKQGQTFIDRMIALVEGAARQQTPNEIALNI LLAGLTIIFLLAVVTLQPFAIYSGGGQRVVVLVALLVCLIPTTIGALLSAIGIAGMDRLVQHNVLATSGRAVEAAGDVNT LLLDKTGTITLGNRQATEFVPINGVSAEAVADAAQLSSLADETPEGRSIVVLAKDEFGLRARDEGVMSHARFVPFTAETR MSGVDLAEVSGIRRIRKGAAAAVMKWVRDHGGHPTEEVGAIVDGISSGGGTPLVVAEWTDNSSARAIGVVHLKDIVKVGI RERFDEMRRMSIRTVMITGDNPATAKAIAQEAGVDDFLAEATPEDKLALIKREQQGGRLVAMTGDGTNDAPALAQADVGV AMNTGTQAAREAGNMVDLDSDPTKLIEVVEIGKQLLITRGALTTFSIANDVAKYFAIIPAMFVGLYPVLDKLNVMALHSP RSAILSAVIFNALVIVALIPLALRGVRFRAESASAMLRRNLLIYGLGGLVVPFIGIKLVDLVIVALGVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 4e-173 | 62 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 3e-173 | 62 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-151 | 56 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 3e-151 | 56 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-151 | 56 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-151 | 56 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-151 | 56 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 3e-151 | 56 |
