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Name : serS (SPC_0963) Accession : YP_002636571.1 Strain : Salmonella enterica RKS4594 Genome accession: NC_012125 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 1005665 - 1006957 bp Length : 1293 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTCGATTCCAATCTGCTGCGTAATGAGCCAGACGCAGTCGCTGAAAAACTGGCACGCCGGGGCTTTAAGCTGGATGT AGATAAGCTGCGCGCTCTTGAAGAGCGTCGTAAAGTTTTGCAGGTCAACACGGAAAACCTGCAGGCGGAGCGTAATTCTC GATCGAAATCCATCGGCCAGGCGAAAGCGCGCGGGGAAGATATTGAGCCTTTACGCCTGGAGGTGAATAAACTGGGCGAA GAGCTGGATGCGGCGAAAGCCGAGCTGGATACCTTGCTGGCGGAGATCCGCGATATCGCGCTGACCATCCCAAACCTGCC TGCGGATGAAGTGCCGGTAGGTAAAGATGAAAACGACAACGTTGAAGTCAGCCGCTGGGGTACCCCGCGTGAATTTGATT TTGAAATCCGCGATCACGTCACCTTAGGGGAAATGCACTCCGGCCTCGACTTTGCCGCCGCGGTTAAGCTGACCGGCTCC CGTTTTGTGGTGATGAAAGGACAGATTGCGCGTATGCATCGCGCATTGTCGCAGTTCATGTTGGATCTGCATACGGAACA GCACGGCTATAGCGAAAACTACGTGCCGTATCTGGTTAACCACGACACGCTGTATGGCACCGGTCAACTGCCGAAATTCG CAGGCGACTTGTTCCATACCCGTCCGCTGGAAGAAGAAGCAGACAGCAGCAATTATGCTTTGATCCCGACGGCGGAGGTT CCGCTGACCAATCTGGTACGCGATGAAATCATCGACGAAGATCAGCTGCCGATTAAAATGACGGCGCATACGCCTTGTTT CCGTTCTGAAGCAGGTTCTTATGGTCGTGATACCCGTGGCCTGATTCGTATGCATCAGTTTGACAAAGTTGAGATGGTGC AGATCGTTCGCCCGGAAGATTCTATGGCTGCGTTGGAAGAGATGACCGGCCACGCGGAAAAAGTGCTCCAGCTACTGGGA CTGCCGTACCGTAAAATCATTCTGTGCACTGGCGATATGGGCTTCGGCGCCTGCAAAACCTATGACCTCGAAGTCTGGGT TCCGGCGCAGAATACCTACCGCGAGATCTCTTCCTGCTCTAACGTCTGGGACTTCCAGGCGCGTCGTATGCAGGCACGTT GTCGCAGCAAGTCCGACAAAAAGACCCGTCTGGTCCATACCCTGAATGGTTCTGGTCTGGCGGTAGGTCGTACCCTGGTG GCTGTGATGGAAAACTATCAGCAGGCTGATGGCCGCATTGAAGTGCCGGAAGTATTACGTCCGTACATGAACGGACTGGA ATATATCGGCTAA Protein sequence : MLDSNLLRNEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVNTENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGE ELDAAKAELDTLLAEIRDIALTIPNLPADEVPVGKDENDNVEVSRWGTPREFDFEIRDHVTLGEMHSGLDFAAAVKLTGS RFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTAEV PLTNLVRDEIIDEDQLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLG LPYRKIILCTGDMGFGACKTYDLEVWVPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLV AVMENYQQADGRIEVPEVLRPYMNGLEYIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-107 | 57 |
