Gene Information

Name : fepD (SPC_0604)
Accession : YP_002636223.1
Strain : Salmonella enterica RKS4594
Genome accession: NC_012125
Putative virulence/resistance : Virulence
Product : iron-enterobactin transporter membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 643950 - 644939 bp
Length : 990 bp
Strand : -
Note : with FepBCG is involved in the transport of ferric enterobactin

DNA sequence :
GTGACGCGCGCGTTTGCCGTGCCCGGATTGTTGTTATTACTGAGTCTCGCCGCGGTTTTAAGCCTGGTCATTGGCGCGAA
ACCGCTGCCCGCCGCCGTCGTGCTGGAGGCGTTCACCGGCGTGTGCCAAAGCGCCGATTGCACTATCGTCCTGGATGCGC
GTTTGCCGCGTACGCTGGCCGGATTACTGGCAGGCGGTGCGTTGGGTCTCGCCGGGGCGCTCATGCAAACACTTACTCGC
AACCCGCTCGCCGATCCGGGGATTCTGGGCGTTAACAACGGCGCCAGCTTCGCCATTGTACTGGGCGCGGCGCTGTTTGG
TTTCTCCACGCCGCTGGAACAGCTTTTCATGGCATTTAGCGGCGCGCTTATCGCATCGCTGATTGTCGCCTTCACCGGTA
GTCAGGGCGGCGGCCAGTTAAGCCCAGTCCGCCTGACACTGGCGGGCGTGGCGCTTGGCGCGGTACTGGAAGGATTGACC
AGCGGCATCGCGCTGTTAAATCCAGAGGTCTATGACCAGCTTCGCTTCTGGCAGGCGGGATCGCTGGACATTCGCAGCCT
GCAAACGTTGAAAGTCGCGCTCGCGCCCGTGGTTATCGCTGGGATCGTGGCGCTATTTCTGAGCCGAGCGCTGAACAGCC
TGAGCCTCGGCAGCGATACCGCGACGGCGCTGGGGAGTAAAGTGGCGCGCACCCAACTTATCGGTTTACTGGCGATTACC
GTCTTGTGCGGCAGCGCAACGGCGCTGGTCGGCCCTATCGCCTTTATTGGTCTGATGATGCCGCATATGGCGCGTTGGCT
GGTGGGCGCAGACCACCGCTGGTCGCTACCAGTGACGCTACTGGCAACCCCTGCTCTGCTGCTTTTTGCCGATATTATTG
GTCGTCTGTTGGTGCCGGGCGAACTCCGCGTATCGGTTGTCAGTGCGTTTATCGGCGCGCCGGTACTTATCTTTCTGGTA
CGCCGTAAATCGAACGGAGGCGGCCTGTGA

Protein sequence :
MTRAFAVPGLLLLLSLAAVLSLVIGAKPLPAAVVLEAFTGVCQSADCTIVLDARLPRTLAGLLAGGALGLAGALMQTLTR
NPLADPGILGVNNGASFAIVLGAALFGFSTPLEQLFMAFSGALIASLIVAFTGSQGGGQLSPVRLTLAGVALGAVLEGLT
SGIALLNPEVYDQLRFWQAGSLDIRSLQTLKVALAPVVIAGIVALFLSRALNSLSLGSDTATALGSKVARTQLIGLLAIT
VLCGSATALVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADIIGRLLVPGELRVSVVSAFIGAPVLIFLV
RRKSNGGGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 1e-32 46
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 1e-32 46
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 1e-32 46
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 1e-32 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepD YP_002636223.1 iron-enterobactin transporter membrane protein VFG0926 Protein 5e-101 89