Gene Information

Name : yfdH (SPC_0577)
Accession : YP_002636197.1
Strain : Salmonella enterica RKS4594
Genome accession: NC_012125
Putative virulence/resistance : Virulence
Product : glycosyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 615483 - 616409 bp
Length : 927 bp
Strand : -
Note : -

DNA sequence :
ATGAAAATCTCGTTAGTCGTTCCGGTCTTCAATGAAGAAGCCACGATACCTATTTTCTATAAAACGGTTCGCGAGTTTGA
AGAGCTAAAACCGTATGAAGTTGAGATTGTTTTCATCAACGACGGAAGCAAAGATGCGACTGAATCAATAATTAACAAAA
TAGCTGCATCTGATCCGCTCGTTATTCCGCTTTCGTTTACGCGAAACTTCGGTAAAGAACCTGCTCTTTTCGCGGGTCTC
GACCATGCAACCGGGGATGCGGTCATTCCTATTGATGTCGATTTACAGGATCCGATAGAAGTTATCCCCCATCTCATTGA
GAAGTGGCAGGCTGGCGCGGATATGGTGCTGGCTAAGCGCTCAGACCGCTCAAATGACGGGCGCATGAAGCGTAAGACAG
CTGAATGGTTTTATAAGCTGCATAATAAAATCAGCAATCCGAAAATTGAAGAGAACGTCGGTGATTTCCGGTTAATGAGC
CGTGAGGTTATCGAAAATATTAAATTAATGCCCGAACGCAACTTGTTCATGAAGGGGGTGCTCAGTTGGGTTGGCGGAAA
AACGGATGTTGTTAAATATGCCCGTGCCGAACGCGTGGCCGGTGATTCGAAATTCAACGGCTGGAAATTATGGAATCTGG
CGCTCGAAGGGATTACCAGCTTCTCAACTTTCCCTCTCCGCATCTGGACGTATATCGGGTTAGCTGTCGCAGGTGTTGCA
TTTCTGTATGGTGCCTGGATGATATTCGACACTCTGGCGTTCGGTAACGCCGTGCGGGGATACCCGTCACTTCTGGTGTC
GATACTGTTTCTTGGTGGCATCCAGCTAATCGGCATTGGTGTACTCGGCGAGTATATCGGAAGAATTTACATTGAAACCA
AAGCAAGACCTAAATATATCATTAAGAAAGTTGGTCAAATAAAATGA

Protein sequence :
MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPLVIPLSFTRNFGKEPALFAGL
DHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKRSDRSNDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMS
REVIENIKLMPERNLFMKGVLSWVGGKTDVVKYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLAVAGVA
FLYGAWMIFDTLAFGNAVRGYPSLLVSILFLGGIQLIGIGVLGEYIGRIYIETKARPKYIIKKVGQIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 2e-121 90
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 1e-118 87

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfdH YP_002636197.1 glycosyltransferase VFG0670 Protein 5e-122 91