Gene Information

Name : yfdH (SPC_0570)
Accession : YP_002636190.1
Strain : Salmonella enterica RKS4594
Genome accession: NC_012125
Putative virulence/resistance : Virulence
Product : glycosyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 610203 - 611129 bp
Length : 927 bp
Strand : +
Note : -

DNA sequence :
ATGAAAATCTCGTTAGTCGTTCCGGTCTTCAATGAAGAAGCCACGATACCTATTTTCTATAAAACGGTTCGCGAGTTTGA
AGAGCTAAAACCGTATGAAGTTGAGATTGTTTTCATCAACGACGGAAGCAAAGATGCGACTGAATCAATAATTAACAAAA
TAGCTGCATCTGATCCGCTCGTTATTCCGCTTTCGTTTACGCGAAACTTCGGTAAAGAACCTGCTCTTTTCGCGGGTCTC
GACCATGCAACCGGGGATGCAGTAATTCCGATTGACGTAGATTTGCAAGACCCTATTGAGGTAATCCCGCGCCTCATAGA
TAAGTGGCAGTCTGGTGCAGATATGGTTCTTGCAAAGCGTTCTGACCGCTCAACGGATGGACGACTGAAACGCAAAACGG
CTGAGTGGTTTTATAAGCTGCATAATAAAATCAGCAATCCGAAAATTGAAGAGAACGTCGGTGATTTCCGGTTAATGAGC
CGTGAGGTTATCGAAAATATTAAATTAATGCCCGAACGCAACTTGTTCATGAAGGGGGTGCTCAGTTGGGTTGGCGGAAA
AACGGATGTTGTTAAATATGCCCGTGCCGAACGCGTGGCCGGTGATTCGAAATTCAACGGCTGGAAATTATGGAATCTGG
CGCTCGAAGGGATTACCAGCTTCTCAACTTTCCCTCTCCGCATCTGGACGTATATCGGGTTAGCTGTCGCAGGTGTTGCA
TTTCTGTATGGTGCCTGGATGATATTCGACACTCTGGCGTTCGGTAACGCCGTGCGGGGATACCCGTCACTTCTGGTGTC
GATACTGTTCCTTGGTGGCATCCAGCTAATCGGCATCGGTGTGCTCGGCGAGTATATCGGAAGAATTTACATTGAAACCA
AAGCAAGACCTAAATATATTTTGAAGGGGAAGAACAGTGTTAAATAA

Protein sequence :
MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPLVIPLSFTRNFGKEPALFAGL
DHATGDAVIPIDVDLQDPIEVIPRLIDKWQSGADMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISNPKIEENVGDFRLMS
REVIENIKLMPERNLFMKGVLSWVGGKTDVVKYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLAVAGVA
FLYGAWMIFDTLAFGNAVRGYPSLLVSILFLGGIQLIGIGVLGEYIGRIYIETKARPKYILKGKNSVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 5e-121 90
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 5e-118 87

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfdH YP_002636190.1 glycosyltransferase VFG0670 Protein 5e-121 89