Gene Information

Name : sgaE (SPC_4535)
Accession : YP_002640026.1
Strain : Salmonella enterica RKS4594
Genome accession: NC_012125
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 4-epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0235
EC number : -
Position : 4640968 - 4641654 bp
Length : 687 bp
Strand : +
Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source

DNA sequence :
ATGCAAAAGCTCAAGCAGCAGGTATTTGACGCTAACATGGATTTGCCCCGTTATGGACTGGTGACGTTTACCTGGGGCAA
CGTCAGCGCTATCGATCGCGAACGCGGATTGGTGGTGATTAAGCCAAGCGGTGTCGCCTATGAAACCATGAAGGTAGATG
ACATGGTGGTAGTGGATATGGATGGCAAAGTGGTGGAGGGAGGTTATCGTCCTTCTTCCGATACTGCTACCCATCTGGCG
CTGTATCAACGCTATCCGTCGCTTGGCGGCGTCGTTCATACCCACTCCACCCACGCCACGGCATGGGCGCAGGCGGGGAT
GGCTATTCCGGCGCTCGGTACCACGCACGCGGACTATTTCTTTGGCGATATTCCTTGTACCAGGGCGTTAAGCGAAGAAG
AAGTGCAGGGCGAGTACGAGCTGAACACCGGTAAGGTGATCATCGAAACGCTGGGCGAGGTGGAACCGCTGCATACGCCA
GGCATTGTCGTGTATCAACACGGGCCATTCGCCTGGGGGAAAGATGCGCACGATGCGGTACATAACGCGGTGGTCATGGA
GGAAGTGGCAAAAATGGCGTGGATTGCGCGCGGCATTAACCCGGCGCTGAATCCCATCGACGATTATCTGATGAATAAAC
ACTTCATGCGTAAGCATGGCCCGAATGCGTATTACGGGCAGAAGTGA

Protein sequence :
MQKLKQQVFDANMDLPRYGLVTFTWGNVSAIDRERGLVVIKPSGVAYETMKVDDMVVVDMDGKVVEGGYRPSSDTATHLA
LYQRYPSLGGVVHTHSTHATAWAQAGMAIPALGTTHADYFFGDIPCTRALSEEEVQGEYELNTGKVIIETLGEVEPLHTP
GIVVYQHGPFAWGKDAHDAVHNAVVMEEVAKMAWIARGINPALNPIDDYLMNKHFMRKHGPNAYYGQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 3e-55 56