|
Name : SPC_4469 (SPC_4469) Accession : YP_002639963.1 Strain : Salmonella enterica RKS4594 Genome accession: NC_012125 Putative virulence/resistance : Unknown Product : DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0210 EC number : - Position : 4574162 - 4575673 bp Length : 1512 bp Strand : + Note : - DNA sequence : ATGCCCCACACTGATACTCCTGAACAGGCTGCTGTCATCGCATGGAAGGGCGAACGTCTGGTTGTCTGTGCTTTTGCCGG GAGTGGCAAAACCACCACACTTCGTCGTTATGCTGAGGAAAATCCAACGGAACGAATGCTCTATATTGCTTATAACCGTG CCATTCGGGATGAGGCGGAGCAGAAATTCCCCTTCAACGTTACCTGCAAAACATCGCATCAACTGGCCTGGCCGACGGTC GGGAAACATTACAGTCATCGTCTGATTAATTCACTACGACTGACCTATGTCGCCCGGGCGCTAAACTCCCGCAACTGGTT GCTGGCCAGACTGACGCTTGATGTTCTGAATCGCTTTATATGCAGCGCGGCCACCGATATTACGCCTGAACACATGCCTG ATCCTGACGACTGTAAGGGGCTACAACCAGGTCAAATCCTGTTTTCAGCAAAGAAAATCTGGGCAATGATGTCGGCCCGT CAGGGGGATTTTCCGGTCACCCATGATACTTATCTAAAGCTTTACCAGTTGAGCAAACCGAATCTTTCTTCCCGCTATAC CACGTTATTGTTTGATGAAGCTCAGGATGCCAATCCTGTCATCAGCGCCATTGTGCTCAACCAGACCTGCCGGGTAGTTC TGGTTGGAGATACTCATCAGCAAATCTACCGCTTTCGTGGGGCGGATAATGCCATGCAGGCTCCGCAACTGGAGAACTCA GACCGTCTTTGGCTAACCCACAGCTTTCGCTTCGGTCCGGAGGTAGCCGGGGTGGCCAACAGGCTGCTGGCCCTGAAGGG CGAAACGCATCAGATAACTGGAAAGGGGGGCGCAGGCCGTGTTCTGCTCACAATGCCGCGGAATTTTGGCCATCATGCTG TTCTTCACCGATCTGTCTGTGGTGTCATCCGGACGGCACTGCACTGGTCGCTGGCTGGCAGGAAAGTATTCTGGGTTGGT GGTATGGAAAGCTACAGAATTGAGGATTTACTGGATCTGTACTGGTTCTCAATTGATATGTCGGAGCGTATGCGACACGA CAGGCTGACCCGTGAATACCGGGACTATGATGAATATCTGCAGATAGCCGAAGATACCGGTGATGTGGAGATGAAGCAGG GGATATTTATTCTTGAACAGTTTTTTCCGTTACCGGACAGACTGAATACGTTACGTGAGCAACGCGTCATCAGTGAATCT GAAGCTGATGTGACGGTATGTACAGCACACAGGAGTAAGGGGCTCGAATGGGACAGGGTGAAGTTACATGATGACTTTCT CGATATTCTGGATCCTGACATGCCGGAAAGTCAGCGGCAGGATGAAATTAACCTCATGTATGTGGCAGCCACCCGGGCGC GTAAAGTGCTTATAACCGATCCGATATTGCACGAGCTTCTGATCCAGCCCCGGGCTGAAGATATAGCCGGAACTTCTGCG GATAAATCGGGTGAGTCAGAAGTGAGTACAGAAAACGATAAAAAAGGGACTGAATATGTTCCGGAAAGTTAA Protein sequence : MPHTDTPEQAAVIAWKGERLVVCAFAGSGKTTTLRRYAEENPTERMLYIAYNRAIRDEAEQKFPFNVTCKTSHQLAWPTV GKHYSHRLINSLRLTYVARALNSRNWLLARLTLDVLNRFICSAATDITPEHMPDPDDCKGLQPGQILFSAKKIWAMMSAR QGDFPVTHDTYLKLYQLSKPNLSSRYTTLLFDEAQDANPVISAIVLNQTCRVVLVGDTHQQIYRFRGADNAMQAPQLENS DRLWLTHSFRFGPEVAGVANRLLALKGETHQITGKGGAGRVLLTMPRNFGHHAVLHRSVCGVIRTALHWSLAGRKVFWVG GMESYRIEDLLDLYWFSIDMSERMRHDRLTREYRDYDEYLQIAEDTGDVEMKQGIFILEQFFPLPDRLNTLREQRVISES EADVTVCTAHRSKGLEWDRVKLHDDFLDILDPDMPESQRQDEINLMYVAATRARKVLITDPILHELLIQPRAEDIAGTSA DKSGESEVSTENDKKGTEYVPES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4664 | NP_458743.1 | putative DNA helicase | Not tested | SPI-7 | Protein | 0.0 | 100 |
| t4355 | NP_807948.1 | DNA helicase | Not tested | SPI-7 | Protein | 0.0 | 100 |
| RL034 | AAP84161.1 | putative DNA helicase | Not tested | PAPI-1 | Protein | 2e-84 | 43 |
| EXA45 | ABD94654.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 7e-86 | 43 |
| unnamed | ABR13373.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 1e-85 | 42 |
