Gene Information

Name : tviC (SPC_4465)
Accession : YP_002639959.1
Strain : Salmonella enterica RKS4594
Genome accession: NC_012125
Putative virulence/resistance : Virulence
Product : Vi polysaccharide biosynthesis protein, epimerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 4570199 - 4571245 bp
Length : 1047 bp
Strand : -
Note : -

DNA sequence : 
ATGACGGCTTACGAAGAACTACGGACCAAACTGGTTCTGGCACCAAAGCGCTGGCTGATCACTGGCGTAGCAGGCTTTAT
TGGCTCCGGCTTATTAGAAGAATTACTCTTTCTCAACCAGACTGTCATTGGACTGGATAACTTTTCCACCGGTTATCAGC
ATAATCTAGACGACGTTCGCACGTCCGTCAGTGAGGAGCAATGGTCGCGATTTATTTTTATTCAGGGTGACATCAGGAAA
TTTACTGACTGTCAGAAAGCGTGTAAGAACGTTGACTATGTTCTCCACCAAGCCGCGCTAGGAAGCGTGCCACGTTCCCT
AAAGGATCCCATCGCGACTAATAGCGCCAATATTGATGGTTTTTTAAATATGTTGACGGCGGCGAGAGATGCTCATGTCT
CTAGTTTCACCTACGCCGCAAGCAGTAGCACCTATGGAGACCATCCCGATTTACCTAAAATTGAGGAACGGATCGGTCGA
CCACTCAGCCCGTATGCGGTAACAAAATACGTCAATGAATTGTACGCTGATGTGTTTGCACGTAGCTATGAATTTAACGC
TATTGGCCTACGCTACTTTAATGTCTTTGGTCGCCGCCAAAATCCTAACGGAGCGTACTCGGCAGTTATTCCTCGCTGGA
TACTATCGCTTCTTAAAGATGAACCAATTTATATCAATGGCGATGGCTCAACAAGCAGGGATTTTTGCTATATAGAGAAT
GTGATTCAGGCCAATCTATTATCAGCAACAACTAATGATTTAGCCTCTAAAAATAAGGTCTATAATGTGGCAGTTGGAGA
TAGAACTTCGTTAAATGAGCTTTATTATCTAATTCGCGATGGGCTTAATTTATGGCGGAACGAACAAAGTAGAGCTGAAC
CAATTTATAAAGATTTTCGTGACGGTGACGTTAAGCATAGCCAGGCAGATATTACCAAAATAAAAACATTTCTTTCATAT
GAGCCTGAATTTGATATCAAAGAAGGACTTAAGCAGACTCTAAAATGGTATATCGATAAACATTCTACTTTGTATTCCTC
GGTATAA

Protein sequence : 
MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRK
FTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGR
PLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN
VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFLSY
EPEFDIKEGLKQTLKWYIDKHSTLYSSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 6e-154 100
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 6e-154 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tviC YP_002639959.1 Vi polysaccharide biosynthesis protein, epimerase VFG0430 Protein 3e-154 100