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Name : tviD (SPC_4464) Accession : YP_002639958.1 Strain : Salmonella enterica RKS4594 Genome accession: NC_012125 Putative virulence/resistance : Virulence Product : Vi polysaccharide biosynthesis protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG4235 EC number : - Position : 4567680 - 4570175 bp Length : 2496 bp Strand : - Note : - DNA sequence : ATGAATTTAATGAAATCGTCAAGGATGTTTACGCTTACAGCCATTGGCAGTTGCCGTATTGTGAGTCCGGTAAAACGAGC TCAGCCTTATTTTAATTTTCAGGCAAACTTTAAGAGAATATATGGTTTTACGCATACGAGCAGCGAGGCATTACAGCAGA TTCGGTTTATTTTGGGCTTGATAGACATTCCTGAAAAGGTCCGACCATTTATTTTTAGACCTAATGTAAACTATTCAAAC ACCGACGTACATAGTCGTTCTGATTTCTATATCATTGAGATTTCAAGTCAGAAGAAGATTATGGCCTATGGGTTCTGCTT ACAAATAAATTATTTAACTCGTCATTTCTATGAATTTTTTAGCCAAACAGAGCGGGCGTGCATGTACTGGTCGTTGGCCA CGCAAGGAAATCAACACAAACTGCTGGCCTATCTCAAAGACGATCCCTGTTTTGCCGGAATGTCGGAAGACGATCGTGCC TTATTAAGCAATATCAATGTCGAGCAGATGGATGAGCATGCTATCGAACAGGATATGATGGAAATCGTTCAGCTTCTTGG TCGCGATCGCGTTATGTTTATGACACATGTTGATGCCGTGACTCGTGCTGGAACCGTCATTCTATCCCGTAGTCGGTTGA TTAAAAATGTCGACACCATCGCCGCCAGGATGGATATTCCCTGCGTTAACCCGACAAATTTGATGGGAAAGTGGGGGCAG AAACGAGCCCTGGAAAAAAATGGCGACGATCTTACTCATTATACCGATATGTTTGGTGACGCGATCGTTGCGGCTATTTT TAAGGGAGTGATCAATAATACTAATCATCATCTTGATGAGGGGCGACAAGAGAAACAGGACCAAATACGTGAGATTACCT TATCGATCACTAAGCAGCTTGCAGATGGCGACATTATTGCTGCATCACAACAACTTTTTGCCGCATTAAGAAATCAGCAG CAAGAGCCCGTTCTAATCCAACTTCGGTCCGTAATCTTCAGCCATTTAGGTTATTATGAACAGGCTTATCAGGATATTAG TGATGTTGAGAAAATTATCGGTACGACTGACAGTACATTACGTTGTCGGCTGAGGTCTCTACATGGATTAGCGCGTTGGC GGGAAGCCTTATCGACGGCAGAGATGATGCTTTCCAATGAAATTGAAGATGAAGAAGTCCTTACCGTTGCCGCCGGCTCA GCCGATGCTTTACAGCTGTTTGATAAGTCATATCATTATTGGAAACGTGTACTATTATTGAATCCTGAAACTCAAAGCGG ATGGGTTAATTTCCTGAGCAGCACGCAATATTTCAATGATGGCAACGCATTCTCTGAAGCTTTCCATGCCGGCATTCAAT CGCAGCGCCTAAATGATACGTTTATGGAAACGGCGTTATCTTTGGCAATCAAATTCAGTGATGAATTGATTTTCATGCAT GCGCTCGAGCAGCTACTCCGCCATGAGTCAGAATTTGCGCTGACGGTATTGTCGACGATTCATGATACCGGTCTCGTTAT CCGCACAGCTTTCTGCATCAAGAATATGAGCTATCATCAAGCGCTTCGCACCTCGTATAAAGATAAAATCCACGACGTTT TTGAGGCATGGAACAATACCGCGCTGTCGCTACATTCGGTTGATGATTTTGTCTCACTGAGTACTTCGCTAGCCTATAGC TACTCTGCATTTATGGTTTATCCCCATTCACGTATTTCTCGCTTTAATAATGAAGTTAAAATGGCATGGCGCGATAAATT AAGAGAAATGTATGAGCGTGAGGATTATGAAAATATCCTGGCAGGGGCGAAAATAGTGTGGCCACTTCTGAAGTTTGATC CCGTTAGCACCGTATATTGTGCAAGAACGCTGGTGAATCTTGGTGCCTGGAAAGACGCGTGCACGTTGGCCCACATGACC TTGATTCGTAACTCGAACATTACCAGCCTGCAGTCGATTATGTTACGCAGCATACGTCATATTAACAACATTCCGTTCCT CATTGATTTGATTGCTAACGTCATGAGCATTACTCTATCATTCCAGAATGCCTCAATGAACAAGTTGTTTGAGAAAGAGT GTCGCAATGTTGCAACCAGAGCCCTTAAATATGTACGCCAGAAGAAAACTGAAGGGCGTCTGAATGAAGCATTGTCTGTA TTGATTAGCCTGAAACGAATTGAGCCTGATGTTTCTCGTCTGATGCGTGAATATAAGCAAATTATCAGATTATTTAATGA GTCACGGAAGGATGGCGGTAGCACTATCACGTCTTATGAACATCTAGACTATGCGAAAAAATTACTCGTTTTTGATAGCG AAAATGCCTATGCCTTGAAATATGCCGCATTAAATGCAATGCATTTACGCGACTACACGCAGGCTTTGCAGTATTGGCAG CGACTGGAGAAAGTGAATGGACCAACGGAGCCGGTGACAAGGCAGATCTCGACCTGCATAACCGCATTACAAAAAAATAC ATCAGGGAAGTCGTAA Protein sequence : MNLMKSSRMFTLTAIGSCRIVSPVKRAQPYFNFQANFKRIYGFTHTSSEALQQIRFILGLIDIPEKVRPFIFRPNVNYSN TDVHSRSDFYIIEISSQKKIMAYGFCLQINYLTRHFYEFFSQTERACMYWSLATQGNQHKLLAYLKDDPCFAGMSEDDRA LLSNINVEQMDEHAIEQDMMEIVQLLGRDRVMFMTHVDAVTRAGTVILSRSRLIKNVDTIAARMDIPCVNPTNLMGKWGQ KRALEKNGDDLTHYTDMFGDAIVAAIFKGVINNTNHHLDEGRQEKQDQIREITLSITKQLADGDIIAASQQLFAALRNQQ QEPVLIQLRSVIFSHLGYYEQAYQDISDVEKIIGTTDSTLRCRLRSLHGLARWREALSTAEMMLSNEIEDEEVLTVAAGS ADALQLFDKSYHYWKRVLLLNPETQSGWVNFLSSTQYFNDGNAFSEAFHAGIQSQRLNDTFMETALSLAIKFSDELIFMH ALEQLLRHESEFALTVLSTIHDTGLVIRTAFCIKNMSYHQALRTSYKDKIHDVFEAWNNTALSLHSVDDFVSLSTSLAYS YSAFMVYPHSRISRFNNEVKMAWRDKLREMYEREDYENILAGAKIVWPLLKFDPVSTVYCARTLVNLGAWKDACTLAHMT LIRNSNITSLQSIMLRSIRHINNIPFLIDLIANVMSITLSFQNASMNKLFEKECRNVATRALKYVRQKKTEGRLNEALSV LISLKRIEPDVSRLMREYKQIIRLFNESRKDGGSTITSYEHLDYAKKLLVFDSENAYALKYAALNAMHLRDYTQALQYWQ RLEKVNGPTEPVTRQISTCITALQKNTSGKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviD | NP_458738.1 | Vi polysaccharide biosynthesis protein | Virulence | SPI-7 | Protein | 0.0 | 99 |
| tviD | NP_807943.1 | VI polysaccharide biosynthesis protein | Virulence | SPI-7 | Protein | 0.0 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tviD | YP_002639958.1 | Vi polysaccharide biosynthesis protein | VFG0429 | Protein | 0.0 | 99 |
