Gene Information

Name : SPC_4438 (SPC_4438)
Accession : YP_002639932.1
Strain : Salmonella enterica RKS4594
Genome accession: NC_012125
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG1475
EC number : -
Position : 4543577 - 4544191 bp
Length : 615 bp
Strand : +
Note : -

DNA sequence :
GTGGCCAGTCTCATTACCCGGTATTTCAGTCAGCAGCTTTCAGATGACGAAAAAGTGGCAGCCCTCAATCATTTTCGCCT
GACACTTCATGAGCTCAGCCCCTTTGCCCGGGAGCCTGTGGACCTGGTGCTGTGGGTGAAAGCCAGCGAAGTGGTGGCCA
ACGATTACAACCCCAATGTTATGGCTGCCGGAGAGAAAAAATTGCTGCAGCACTCACTGCAGGAGGACGGCTTTACCCAG
CCCGTCGTTGTATCTGAAGAGAAAGGGCAGTACCTGGTCGTGGATGGTTTTCACCGGCAGTTGCTGGGCAGACGCGAGTC
AGGAGCAGGAAAACGCCTGAAAGGCTGGTTGCCCGTCACCTGTATCAATCCCGAACGAAAGGGGAAGGCTGAACGAATTG
CCTCGACGATCAGGCATAACCGCGCCCGAGGGAAGCATCAGATAGCGTCGATGTCAGATATTGTCAGAGACCTTGCCCGT
CTCGGATGGGCAGATGAACGTATTGGCAAGGAGCTGGGAATGGACAGGGATGAAGTTCTTCGTCTGAAGCAGATAAGTGG
ACTGACAGAATTATTTGAAGAAGAGGACTTCAGTCCGGCCTGGACGGTTCGCTAA

Protein sequence :
MASLITRYFSQQLSDDEKVAALNHFRLTLHELSPFAREPVDLVLWVKASEVVANDYNPNVMAAGEKKLLQHSLQEDGFTQ
PVVVSEEKGQYLVVDGFHRQLLGRRESGAGKRLKGWLPVTCINPERKGKAERIASTIRHNRARGKHQIASMSDIVRDLAR
LGWADERIGKELGMDRDEVLRLKQISGLTELFEEEDFSPAWTVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 4e-93 100
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 7e-93 99
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 1e-78 80
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 1e-78 80
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 3e-78 79
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 3e-78 79
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 8e-78 78
ORF_30 AAZ04440.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 9e-63 77
APECO1_3503 YP_854305.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-62 77
c5208 NP_757056.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-62 77
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 1e-28 47
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 6e-30 47
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 9e-30 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPC_4438 YP_002639932.1 hypothetical protein VFG1505 Protein 3e-78 78