Gene Information

Name : SPC_4437 (SPC_4437)
Accession : YP_002639931.1
Strain : Salmonella enterica RKS4594
Genome accession: NC_012125
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3969
EC number : -
Position : 4542318 - 4543565 bp
Length : 1248 bp
Strand : +
Note : -

DNA sequence :
ATGTCAGATAACGTCATTATGCAACGTAATCAAATACAGAAGATCAGAACCGGGGAGGATGTGCTGTCTGCGGTTACAGG
CCGTGTGGAGTGGATATTTGATACCTTTTCTCAGGTTTGTCTGTCTTTTTCAGGTGGAAAAGACTCCACCGTTCTGTTTC
ATATCGCCGCCACAATAGCCCGCAGGAAACACCGGCGTTTCTCTGTCCTTTTTATTGACTGGGAAGCCCAGTATCAGTGC
ACGATTGAGCATGTTCAGAAAATGAAGGATCTCTACAGTGATGTGACGGAGACGTTTTTCTGGGTGGCTCTCCCGCTGAC
GACGGTAAATGGTGTTTCACAGTTTCAGCCAGAATGGGTCTGCTGGGAGCCCGATGTGGAGTGGGTGCGTCAGCCGCCGA
CAGATGCCATTACTGATACGACGTATTTTCCTTTTTACCGTTACGCCATGACATTTGAAGAGTTTGTCCCGGCATTTTCG
ACTTGGTTCACGGGCAATCAGTGTGGAGTGGCCATACTGACTGGCGTTCGTGCAGATGAGTCCCTTAACAGGTTTATAGG
CCTTACCAGCCAGCGAAAGCTTCGTTATGCCGATGACAAACCCTGGACCACCGCCTCTCCTGAGGGGTTTTATTACACGA
TGTGTCCTCTGTATGACTGGAAAGCCCGGGACATCTGGATTTACCATGCCCGTACGGGCGCCATTTACAACCCGCTGTAT
GACCTGATGTACAGAGCCGGCGTCCCCCTGCGGAATATGCGGGTCTGTGAACCTTTTGGCCCCGAACAGCGCCGCGGTCT
GTGGCTTTATCATGTACTGGAGCCTGAGACCTGGGCGCGAATGTGTGCCCGCGTCTCCGGAGCGGCCAGCGGGGCCATTT
ATGCTAATGAAAGTGGCGCTTATTTTGCCCTGCGCAAACGCATCTCCAGACCAGCACATCATACCTGGCGCAGCTATGCC
ATGTTTCTTCTTGATGTCATGCCACAAAAAACAGCCGAGCATTACCGGAACAAGATAGCGGTATACCTGCGCTGGTATCA
GACGCACGGTTATCCGGAAGATATTCCGGATGAACAGGAGAATGACCTGGGCAGCAGGGATATTCCCTCCTGGCGTAGGA
TATGCAAGACACTGATTAAAAATGACTTCTGGTGCCGGACCTTATCTTTCAGTCCTAATAAGCCCCGGCATTACGAACGT
TACCTGGAGCGTATGAAACAAAGGAGGAAGGAATGGGGGATATTGTAA

Protein sequence :
MSDNVIMQRNQIQKIRTGEDVLSAVTGRVEWIFDTFSQVCLSFSGGKDSTVLFHIAATIARRKHRRFSVLFIDWEAQYQC
TIEHVQKMKDLYSDVTETFFWVALPLTTVNGVSQFQPEWVCWEPDVEWVRQPPTDAITDTTYFPFYRYAMTFEEFVPAFS
TWFTGNQCGVAILTGVRADESLNRFIGLTSQRKLRYADDKPWTTASPEGFYYTMCPLYDWKARDIWIYHARTGAIYNPLY
DLMYRAGVPLRNMRVCEPFGPEQRRGLWLYHVLEPETWARMCARVSGAASGAIYANESGAYFALRKRISRPAHHTWRSYA
MFLLDVMPQKTAEHYRNKIAVYLRWYQTHGYPEDIPDEQENDLGSRDIPSWRRICKTLIKNDFWCRTLSFSPNKPRHYER
YLERMKQRRKEWGIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t4277 NP_807875.1 hypothetical protein Not tested SPI-7 Protein 0.0 100
STY4583 NP_458667.1 conserved hypothetical protein Not tested SPI-7 Protein 0.0 99
z1203 CAD33763.1 Z1203 protein Not tested PAI I 536 Protein 7e-176 88
APECO1_3502 YP_854308.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-177 87
c5209 NP_757057.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-177 87
ibrA ADD91735.1 putative phosphoadenosine phosphosulfate reductase IbrA Not tested PAI-I AL862 Protein 4e-176 87
Z1643 AAQ19139.1 putative phosphoadenosine phosphosulfate reductase Not tested PAI I CL3 Protein 1e-176 87
Z1203 NP_286738.1 hypothetical protein Not tested TAI Protein 4e-176 87
ORF_31 AAZ04441.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-177 87
Z1643 NP_287146.1 hypothetical protein Not tested TAI Protein 4e-176 87

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPC_4437 YP_002639931.1 hypothetical protein VFG1504 Protein 4e-176 88