Gene Information

Name : ssb (SPC_4400)
Accession : YP_002639898.1
Strain : Salmonella enterica RKS4594
Genome accession: NC_012125
Putative virulence/resistance : Virulence
Product : single-stranded DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 4509288 - 4509824 bp
Length : 537 bp
Strand : +
Note : binds to single stranded DNA and PriA helcase facilitate replication restart

DNA sequence : 
ATGGCTTCTAAAGGTGTAAACAAAGTTATTCTGGTGGGAAATCTGGGACAGGATCCTGAGGTGCGTTATATGCCAAATGG
CGGTGCCGTGGTAAACCTCAGTCTGGCAACCTCAGATACCTGGACAGATAAACAGACCGGTGACAAAAAAGAGCGCACTG
AATGGCACAGGGTGGTTCTTTACGGCAAGCTGGCCGAAATTGCCAGTGAGTATCTGCGTAAGGGCTCCCAGGTATACATC
GAAGGTGCATTACGCACCCGCAAATGGACGGATCAGTCTGGCGTTGAAAAGTACACTACAGAAGTGGTCGTCAGCCAGTC
AGGTACGATGCAGATGTTGGGCGGACGAAATAGTGCGGGAAGTGGGCAGCAACAGGGCGGCTGGGGTCAGCCTCAGCAAC
CAGCAGCGCCTTCTCACAGCGGGATGCCACCTCAACAGCATCCTGCAAATGAGCCGCCAATGGACTTCGACGATGATATC
CCGTTCGCGCCGTTCGGGCACAGTGTGGCCAGACATGCGCTTTATGTGCTGTCCTGA

Protein sequence : 
MASKGVNKVILVGNLGQDPEVRYMPNGGAVVNLSLATSDTWTDKQTGDKKERTEWHRVVLYGKLAEIASEYLRKGSQVYI
EGALRTRKWTDQSGVEKYTTEVVVSQSGTMQMLGGRNSAGSGQQQGGWGQPQQPAAPSHSGMPPQQHPANEPPMDFDDDI
PFAPFGHSVARHALYVLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 3e-69 100
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 2e-69 100
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 3e-69 100
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 2e-34 56
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 2e-35 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssb YP_002639898.1 single-stranded DNA-binding protein VFG0576 Protein 2e-43 66